Pairwise Alignments

Query, 463 a.a., gamma-aminobutyrate transporter from Pseudomonas simiae WCS417

Subject, 470 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

 Score =  488 bits (1256), Expect = e-142
 Identities = 250/443 (56%), Positives = 323/443 (72%), Gaps = 7/443 (1%)

Query: 10  LEQGLKPRHVTMLSIAGVIGAGLFVGSGHAIAAAGPAVLLAYAAAGTLVVLVMRMLAEMA 69
           L   LK RH+TM+SIAGVIG  LFVGSG  I +AGPA +LAY A G LVVL+MRML EMA
Sbjct: 18  LSASLKSRHLTMMSIAGVIGGALFVGSGSVIHSAGPAAVLAYLAGGILVVLIMRMLGEMA 77

Query: 70  VASPDTGSFSTYADRAIGHWAGFTIGWLYWWFWVLVIPLEANAAATILHAWFPDIAIWVF 129
            +SPDTGSFSTYADRAIG WAGFTIGWLYWW+WV+++  EA  A  ILH +FPD+++ VF
Sbjct: 78  TSSPDTGSFSTYADRAIGRWAGFTIGWLYWWYWVILMAWEAYVAGKILHGFFPDVSVNVF 137

Query: 130 TLVITLLLTATNLFSVKNYGEFEFWFALIKVVAIVGFVILGLAAIFGFLPTSQVSGVSHL 189
            L  TLLL   N F+VK+YGEFEFWFALIKV+AIV F+I+  AA+       +V G+SHL
Sbjct: 138 VLATTLLLITVNFFNVKHYGEFEFWFALIKVIAIVCFLIVCTAAVMNIWQFGEVRGISHL 197

Query: 190 FDTQGFMPNGMGAVLAAILTTMFSFMGTEIVTIAAAESKNPGQQITKATNSVIWRIGLFY 249
              +GFMPNG+  V+ A+L  MF+F+G EIVTIAA+E+K+P  QI KATNSV+WR+ LFY
Sbjct: 198 -TAEGFMPNGITTVIGALLGVMFAFLGAEIVTIAASEAKDPAAQIVKATNSVVWRVCLFY 256

Query: 250 LLSIFIVVSLVPWNDPTL--AAVGSYQTVLERMGIPNAKLIVDLVVLVAVTSCLNSALYT 307
           + SIF++V LVPWNDP L  +  G+Y+  LE +G+P A+L+++ VVL +V+SCL S  YT
Sbjct: 257 VGSIFLIVCLVPWNDPHLGVSGYGAYRRTLELLGVPYAELLMNFVVLTSVSSCLISGHYT 316

Query: 308 ASRMLFSLGRRGDAPAVAKRTNK-SGTPYWAVLLSTGAAFLAVFANY---VAPAAVFEFL 363
           ASRMLFSL +RGDAP+  K T   +G P +A++ S   A +    N+   + P  V + L
Sbjct: 317 ASRMLFSLAQRGDAPSFFKITRAGTGVPVYAIMGSCAVAVVCALINFSETLRPKDVLDTL 376

Query: 364 LASSGAIALLVYLVIAVSQLRMRQKRTAAGEKIVFKMWLFPGLTYAVMVFIVGTLTIMLF 423
           + ++G IALLVYLVIA SQLRMR+K  A G+++  KMWLFP LTY V+ FIV  L  M F
Sbjct: 377 MNTTGMIALLVYLVIAFSQLRMRRKLIAEGKEVRLKMWLFPWLTYLVIAFIVAALVTMAF 436

Query: 424 QEAHRIEIIATGVLSLLVVAAGL 446
              ++I +I+TG+ + +VVA G+
Sbjct: 437 MPDYQILVISTGIAAAVVVAMGV 459