Pairwise Alignments

Query, 477 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 477 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score =  601 bits (1550), Expect = e-176
 Identities = 301/476 (63%), Positives = 367/476 (77%)

Query: 1   MELHVVINGRKDLAEQLYQQLREAIGSGRLAAGAQLPPSRLLAQQLGVSRKTVSDTYATL 60
           MELH+ + GRK LA+QLYQQLR+ I SG LAAG+QLPP+RLLA+QLGVSRKTV++ Y+ L
Sbjct: 1   MELHIRLEGRKGLADQLYQQLRDGIDSGHLAAGSQLPPTRLLAEQLGVSRKTVAEAYSRL 60

Query: 61  TYEGLLIGKTGRGTFVNARAPQTERQQGATDLACAANLAKWQSLPSPMRHPTRDSTLRYE 120
           TY+ LL G  GRGTFV  R P    +     LA AA+L +WQ   + +      +  RY+
Sbjct: 61  TYDNLLSGVVGRGTFVTPRHPLRSNESATLPLAGAASLERWQQRATVLSQRQLQAPSRYD 120

Query: 121 FIGGATSRNQFPQDEWRRCTQDALRRIAQNSGFYSQPEGLPALRSAIAGHIAFSRGVNCR 180
           F+GGA+S+ QFP D+WR C   ALRR  ++       +GLP LR AIA HIA+SRGV+C 
Sbjct: 121 FVGGASSKAQFPFDQWRSCLNYALRRSQRHPERQFPAQGLPELREAIAHHIAYSRGVHCS 180

Query: 181 DSDIVVTNGAQQALDLIARVVLEPGSLVAMEDPGYSPARQMFMAMGASVVSVPVDEQGIR 240
            +D++V NGAQQALDLIARV++EPG  VAMEDPGY PARQ+F+A+GA + SVPVD++G+ 
Sbjct: 181 AADLLVCNGAQQALDLIARVLVEPGCQVAMEDPGYPPARQLFLALGARLQSVPVDDEGLC 240

Query: 241 VDRIPDGTRLIYVTPSHQFPLGMPMSPARREALLARAFELGAIIIEDDYDSEFRYEGRPT 300
           V++I DGTRLIYVTPSHQFPLGMPMS  RR ALLARA ELGA+IIEDDYD EFRY G  +
Sbjct: 241 VEQIADGTRLIYVTPSHQFPLGMPMSEPRRHALLARAAELGALIIEDDYDCEFRYHGPAS 300

Query: 301 DSLQSLDTRGVVAYVGTFSKTLLPELRLGYAVLPPAIYGAVLKAKQLTDQHSSTLPQWAL 360
           D+LQ LD  G+VAYVGTFSKTLLPELRLGYAVLPPA+  A   AK L+D HS TL QWAL
Sbjct: 301 DALQRLDRHGLVAYVGTFSKTLLPELRLGYAVLPPAVLQAACVAKHLSDWHSPTLLQWAL 360

Query: 361 AKFISEGYLLKHIRRCHTVYAGRRERILQRLAGDLSPWFEAVPTVAGFHMAALCKVPVNI 420
           A+F+ EG+L KHIRRCH VY+ RRERIL RL GDL+PWF A+P  AGFH++AL    V++
Sbjct: 361 ARFLGEGHLNKHIRRCHEVYSARRERILARLGGDLAPWFSAIPASAGFHLSALATPGVDV 420

Query: 421 PLLMELARRVEVGVYPLDVFFHDAPIRPGLIIGFGAIETLDIDPALDKVRDILLQI 476
            LL  LAR+VEVG+Y L  FF +AP+RPGL++GFGAIE LDIDPALD+VRD L ++
Sbjct: 421 ELLANLARKVEVGLYSLAPFFSEAPVRPGLLMGFGAIELLDIDPALDRVRDTLQRL 476