Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 261 a.a., ABC transporter for L-Arginine, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score =  184 bits (466), Expect = 2e-51
 Identities = 110/256 (42%), Positives = 157/256 (61%), Gaps = 13/256 (5%)

Query: 5   KKFLLAAAVSMA---FSATAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKM 61
           KK +L  A++++     A A  + LK+GIEAAYPPF +K   G++VGFD DIG+ALC +M
Sbjct: 2   KKLVLLGALALSVLSMQAFAEGKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCEEM 61

Query: 62  KVEKCEVYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKAT 121
           KV KC     ++DG+IPAL  +K D ++SS+SIT++RK +VDFT+ YY    + +  + T
Sbjct: 62  KV-KCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNRYYLTPARLVLKEGT 120

Query: 122 ADFKTDAAYLKGKVIGAQRATLAGTYLEDKLPDTEAKL--YDTQENAYLDLTSGRLDGIL 179
           A        LKGK IG QR ++   + ++ L    A +  Y +Q   YLD+ +GRLDG +
Sbjct: 121 A-VSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATIVPYSSQNEIYLDVEAGRLDGTV 179

Query: 180 AD-KYVQYEWLKSKDGSAYEFKGDPVVES----DKIGIAVRKGDPLR-ERLNKALAEIKA 233
           AD   +Q  +L +  G  Y F G    ++    D IGIAVRKGD    +R+N A+A I+A
Sbjct: 180 ADATLLQEGFLDTPAGKGYAFTGPAFTDAKYFGDGIGIAVRKGDKENLDRINAAIAAIRA 239

Query: 234 DGTYKKINDKYFPFSI 249
           +G YK+I  KYF F I
Sbjct: 240 NGKYKEIEKKYFNFDI 255