Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  148 bits (374), Expect = 9e-41
 Identities = 94/248 (37%), Positives = 144/248 (58%), Gaps = 15/248 (6%)

Query: 9   LAAAVSMAFSATAMAET---LKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEK 65
           L AA+ +   ATA A+    ++ G+   YPPF +  A G++ GFD ++G+A+CAK++V K
Sbjct: 7   LFAALLLPLCATAHAQEWKEIRFGVFPEYPPFESVAADGSLQGFDIELGNAICAKLEV-K 65

Query: 66  CEVYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATADFK 125
           C    +++DG+IPAL A+KFD ++SS+++T  R+  +DF+D  + +    I  K +ADF 
Sbjct: 66  CTWVHNEFDGMIPALRARKFDAIMSSMAVTPAREKIIDFSDRLFLSPTSVITRK-SADFG 124

Query: 126 TDAAYLKGKVIGAQRATLAGTYLEDKLP--DTEAKLYDTQENAYLDLTSGRLDGILADKY 183
                L GK +G  + +L   Y    L     + K Y +Q+  Y DL +GRLD  L DK 
Sbjct: 125 DTPESLMGKQVGVLQGSLQEAYARAHLAKLGAQIKAYQSQDQNYADLQNGRLDATLTDKL 184

Query: 184 -VQYEWLKSKDGSAYE----FKGDPVVESDKIGIAVRKGD-PLRERLNKALAEIKADGTY 237
             Q  +L   +GS ++    FK DP +  D I + +RK D  LR  +NK +A ++ADGTY
Sbjct: 185 EAQLNFLSKPEGSDFKTGPAFK-DPTLPLD-IAMGLRKNDQALRALINKGIAAVQADGTY 242

Query: 238 KKINDKYF 245
            +I  KYF
Sbjct: 243 AQIQKKYF 250