Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 4e-49
 Identities = 107/249 (42%), Positives = 143/249 (57%), Gaps = 9/249 (3%)

Query: 8   LLAAAVSMAFSATAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEKCE 67
           +LA  +  +  A A  +TL++GIEAAYPPF +K   G +VGFD DIG+ALCA+MKV KC 
Sbjct: 9   VLALGLLASSHAMAAEKTLRIGIEAAYPPFASKTEEGKIVGFDYDIGNALCAQMKV-KCV 67

Query: 68  VYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATADFKTD 127
               ++DG+IP+L  KK D  +SS++I E+RK +VDFT  YY    + +  K  A     
Sbjct: 68  WVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVM-KEGAVVDDQ 126

Query: 128 AAYLKGKVIGAQRATLAGTYLED--KLPDTEAKLYDTQENAYLDLTSGRLDGILADKYVQ 185
            A LKGK IG QRAT    Y  +  +      K Y   E  Y+DL +GRLD I AD    
Sbjct: 127 YASLKGKTIGVQRATTTDRYATEVFEPKGINVKRYSNNEEIYMDLAAGRLDAIFADTIPL 186

Query: 186 YEWLKSKDGSAYEFKG----DPVVESDKIGIAVRKGD-PLRERLNKALAEIKADGTYKKI 240
            ++L+   G  Y F G    DP    +  GIAVRKG+  L  +LN A+  I+A G Y+KI
Sbjct: 187 NDFLQMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVGQLNAAIDGIRASGEYQKI 246

Query: 241 NDKYFPFSI 249
           + +YF   I
Sbjct: 247 SQQYFKSDI 255