Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  149 bits (377), Expect = 4e-41
 Identities = 94/247 (38%), Positives = 143/247 (57%), Gaps = 13/247 (5%)

Query: 8   LLAAAVSMAFSATAMAE--TLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEK 65
           L A A+ MA  +T   E   L+ G++ +Y PF +K A G++VGFD D+G+A+CA++KV K
Sbjct: 8   LSALALCMAAGSTLAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAELKV-K 66

Query: 66  CEVYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATADFK 125
           C+   SD+DG+IP L A KFD ++SS+++T  R+ A+DF+   +S     +  K  A + 
Sbjct: 67  CKWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSELFSGPTSLVFKKG-AGYS 125

Query: 126 TDAAYLKGKVIGAQRATLAGTYLEDKL--PDTEAKLYDTQENAYLDLTSGRLDGILADK- 182
           T  + LKGK +G ++ T+   Y +  L       K Y  Q+  Y DLTSGRLD  + D  
Sbjct: 126 TPES-LKGKSVGYEQGTIQEAYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDASVQDML 184

Query: 183 YVQYEWLKSKDGSAYEFKG---DPVVESDKIGIAVRKGD-PLRERLNKALAEIKADGTYK 238
             +  +LKS  G+ YE      DP++ S K  I ++KG+  L+  L+K +  +  DGTY 
Sbjct: 185 QAELGFLKSPAGAGYEVSAAIDDPLLPS-KTAIGIKKGNTELKTLLDKGIKALHDDGTYA 243

Query: 239 KINDKYF 245
            I  K+F
Sbjct: 244 TIQKKHF 250