Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  410 bits (1054), Expect = e-119
 Identities = 212/252 (84%), Positives = 223/252 (88%), Gaps = 4/252 (1%)

Query: 1   MQNYKKFLLAAAVSMAFSATAMA-ETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCA 59
           M  YKKFLLAAA ++  SA AMA E L+MGIEAAYPPFNNKDASGNVVGFDKDIGDALCA
Sbjct: 1   MHTYKKFLLAAAATLVMSANAMAAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCA 60

Query: 60  KMKVEKCEVYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPK 119
           KMKVE C V  SDWDGIIPALNAKKFDFLVSSLSIT+ERK AVDFT+PYYSNKLQFIAPK
Sbjct: 61  KMKVE-CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPK 119

Query: 120 ATADFKTDAAYLKGKVIGAQRATLAGTYLEDKLPDTEAKLYDTQENAYLDLTSGRLDGIL 179
              DFKTD   LKGKVIG QRATLAGTYLED  PD E KLYDTQENAYLDL SGR+DGIL
Sbjct: 120 -NVDFKTDKESLKGKVIGTQRATLAGTYLEDNYPDVEIKLYDTQENAYLDLVSGRIDGIL 178

Query: 180 ADKYVQYEWLKSKDGSAYEFKGDPVVESDKIGIAVRKGD-PLRERLNKALAEIKADGTYK 238
           ADKYVQYEWLKSKDGS +EFKG+PV++SDKIGIAVRKGD  LR+ LNKALAEIKADGTYK
Sbjct: 179 ADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDDLNKALAEIKADGTYK 238

Query: 239 KINDKYFPFSIE 250
           KINDKYFPFSIE
Sbjct: 239 KINDKYFPFSIE 250