Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 260 a.a., lysine/arginine/ornithine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  156 bits (395), Expect = 3e-43
 Identities = 93/250 (37%), Positives = 140/250 (56%), Gaps = 10/250 (4%)

Query: 8   LLAAAVSMAFSATAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEKCE 67
           LL    + A S  A+ ET+++G +  Y PF++KDA G+ VGFD D+G+ +C +M+V KC 
Sbjct: 10  LLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQV-KCT 68

Query: 68  VYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATADFKTD 127
              SD+D +IP+L AKK D ++SSLSIT++R+  + F+D  Y+   + IA K  +  +  
Sbjct: 69  WVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKG-SPIQPT 127

Query: 128 AAYLKGKVIGAQRATLAGTYLED--KLPDTEAKLYDTQENAYLDLTSGRLDGILADKYVQ 185
              LKGK +G  + +    Y  +  +    +   Y  Q+  Y DL +GRLD  L D+   
Sbjct: 128 LDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAA 187

Query: 186 YE-WLKSKDGSAYEFKGDPVVE----SDKIGIAVRKGD-PLRERLNKALAEIKADGTYKK 239
            E +LK   G  + F G  V +     D  G+ +RK D  L    NKAL E++ DGTY K
Sbjct: 188 SEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGTYDK 247

Query: 240 INDKYFPFSI 249
           +  KYF F++
Sbjct: 248 MAKKYFDFNV 257