Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 243 a.a., ABC transporter substrate-binding protein ArtJ from Escherichia coli ECRC62

 Score =  186 bits (471), Expect = 5e-52
 Identities = 110/246 (44%), Positives = 150/246 (60%), Gaps = 9/246 (3%)

Query: 5   KKFLLAAAV-SMAFSATAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKV 63
           KK +LAA + S  F A+A AE +  G+ A YPPF +  A+  +VGFD D+  ALC +M+ 
Sbjct: 2   KKLVLAALLASFTFGASA-AEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA 60

Query: 64  EKCEVYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATAD 123
           E C      +D +IP+L  +K+D ++S + IT ER   V FT PYY N    IA K T  
Sbjct: 61  E-CTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDT-- 117

Query: 124 FKTDAAYLKGKVIGAQRATLAGTYLEDKLPDTEAKLYDTQENAYLDLTSGRLDGILADKY 183
           +KT A  LKGK IG +  T    Y++D+ P+ +   YD+ +NA++DL +GR+DG+  D  
Sbjct: 118 YKTFAD-LKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTA 176

Query: 184 VQYEWLKSKD--GSAYEFKGDPVVESDKIGIAVRKGD-PLRERLNKALAEIKADGTYKKI 240
           V  EWLK+    G A E   DP      +GIAVR  +  L E+LN ALA IKADGTY+KI
Sbjct: 177 VVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKI 236

Query: 241 NDKYFP 246
           ND++FP
Sbjct: 237 NDQWFP 242