Pairwise Alignments

Query, 235 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 241 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  219 bits (557), Expect = 5e-62
 Identities = 113/229 (49%), Positives = 158/229 (68%), Gaps = 4/229 (1%)

Query: 8   KVLLVEDDEKLAGLIAHFLAQHGFEVRVEHRGDEALAAFLAFKPKIVVLDLMLPGQSGLH 67
           +VL+VEDD++LA L   +L  +G +V VE  G  A A  +A +P +V+LDLMLPG+ GL 
Sbjct: 7   QVLIVEDDQRLAELTREYLESNGLQVSVEGDGALAAARIIAEQPDLVILDLMLPGEDGLS 66

Query: 68  VCRAIRAVSDTPIVILTAKEDDLDHILGLESGADDYVIKPIKPPVLLARLRALQRRQAPE 127
           +CR +R   D  I++LTA+ DD+D +LGL+ GADDYV KP++P +LLAR++AL RR  P 
Sbjct: 67  ICRKVRQRYDGVILMLTARTDDMDQVLGLDMGADDYVCKPVRPRLLLARIQALLRRSEPT 126

Query: 128 PTV----RGALAFGRLAIDRSCRVVSLGDDKIDLTTMEFELLWLLASNSGTILSRDDILN 183
             V    +  L FG L +D + R   L +D I+LT+ EF+LLWLL +N+G ILSR+++  
Sbjct: 127 EPVAVENQRRLQFGPLVVDNALREAWLNNDGIELTSAEFDLLWLLVANAGRILSREELFI 186

Query: 184 RMRGIAFDGLNRSVDVYISKLRSKLNDNPREPVCIKTIWGKGYLFNPFA 232
            +RGI +DG +RS+DV IS++R K+ D+P  P  IKTI  KGYLF P A
Sbjct: 187 ALRGIGYDGQDRSIDVRISRIRPKIGDDPIHPRLIKTIRSKGYLFVPEA 235