Pairwise Alignments

Query, 272 a.a., transposase from Pseudomonas simiae WCS417

Subject, 305 a.a., COGs COG3777 from Variovorax sp. SCN45

 Score =  215 bits (548), Expect = 8e-61
 Identities = 124/276 (44%), Positives = 156/276 (56%), Gaps = 17/276 (6%)

Query: 6   WIGRSETAHDHLSHNLLKRIAATFG--EAVPEDGADIPSLWQWCFFQDPLPETALGTDGH 63
           W GRSET  D ++   ++ ++AT    +A P  G  +P LW W +F     ++ +G DGH
Sbjct: 30  WQGRSETLADDITAAPVRALSATLDRDDAAPVAGTRLPELWHWLYFLPHHRQSEIGEDGH 89

Query: 64  PARGGFLPPADNRNRMWAGGRI--EFLHALRAGEAATRVSTIVQVEEKTGRTGSLLFVTV 121
             RGGFLPP     RMWAGGR+  E  + LR G+   R STI  V  K GRTG L+FV V
Sbjct: 90  ARRGGFLPPVPLPRRMWAGGRLRWEAGNPLRVGDKVERTSTIASVTHKAGRTGELVFVLV 149

Query: 122 RHDYSQDGRLAIREEQDIVYREPTPPKSGSGDAL-------EQGGWSETVDPTPTLLFRY 174
           RH+   +  LA+ EE DIVYR    P    GDA+       +   +S  + P   LLFRY
Sbjct: 150 RHEVRNERGLALTEEHDIVYRAAAQP----GDAVPPPTPAPKDAAFSRDIAPDDVLLFRY 205

Query: 175 SAVTFNGHRIHYDYPYVTGTEGYSGLVVHGPLIATLSLRAFCRANPGATLRCFTYRGVRP 234
           SA+TFNGHRIHYD  YVT  EGY GL+VHGPLIATL +    R  PGA L  F +R VRP
Sbjct: 206 SALTFNGHRIHYDRRYVTQVEGYPGLIVHGPLIATLLVDLLRRNVPGAQLARFEFRAVRP 265

Query: 235 LIAPQPFEVGGRV-IEAGVAQLWAGNVEG-LAQQAS 268
                PF V G+   +     LW  + +G L  QA+
Sbjct: 266 TFDIAPFRVHGKPGADGKTFSLWGEDADGWLTMQAT 301