Pairwise Alignments

Query, 387 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  181 bits (459), Expect = 3e-50
 Identities = 120/363 (33%), Positives = 192/363 (52%), Gaps = 13/363 (3%)

Query: 9   LNAIREGVRALCAEFDAA-YWRRI---DEEKGFPEAFVKALTDAGWLSAMIPEAYGGSGL 64
           LNA +E +R    +F  A  W      D E  FP+   + L   G     +PE +GG+GL
Sbjct: 3   LNADQEAIRDAVRDFSQAELWPNAPKWDREHSFPKEAHQGLAALGAYGICVPEEHGGAGL 62

Query: 65  GLAEASVILEEVNRCGGNSGT---VHGQMYNMFTLLRHGSEAQKRLYLPKLASGELRLQS 121
                +++LEE+    G + T   V     N   L+R+G+  QK+ +L  LA G++ L +
Sbjct: 63  DYLTLALVLEEIAAGDGGTSTAISVTNCPVNAI-LMRYGNAQQKKQWLEPLAQGKM-LGA 120

Query: 122 MGVTEPSTGTDTTKIKTTAIKRGDKYVINGQKVWISRVQHSDLMILLARTTPLAEVKKKS 181
             +TEP  G+D + ++TTA K GD YVI+G K +I+  ++  + I++A T   A  +   
Sbjct: 121 FCLTEPQAGSDASSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKR--- 177

Query: 182 EGMSIFLVDLREAIGNGLTVQPIANMVNHETNELFFDNLELPLDSLIGEEGKGFKYILDG 241
            GMS FLV       N   ++      + +T ++ FD   +P+++LIG EG+G+K  L  
Sbjct: 178 -GMSAFLVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENLIGAEGEGYKIALGA 236

Query: 242 LNAERTLIAAECIGDGRWFIEKASAYARDRVVFGRPIGQNQGVQFPIAEAHIEIEAADLM 301
           L   R  IAA+ +G  R   + A AYA++R  FG  I   Q V F +AE   ++EAA  +
Sbjct: 237 LEGGRIGIAAQSVGMARSAFDVALAYAKERQAFGGSIFDQQAVGFRLAECATQLEAARQL 296

Query: 302 RWRACEEYDSGKQAGASANMAKYLAAKASWEAANACLQTHGGFGFACEYDVERKFRETRL 361
            W A    D+G+     A MAK  A++ +    +A +QT GG+G+  ++ +ER +R+ R+
Sbjct: 297 IWHAAALRDAGRPCLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFPLERIYRDVRV 356

Query: 362 YQV 364
            Q+
Sbjct: 357 CQI 359