Pairwise Alignments
Query, 387 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417
Subject, 567 a.a., (2S)-methylsuccinyl-CoA dehydrogenase from Azospirillum sp. SherDot2
Score = 168 bits (425), Expect = 4e-46
Identities = 124/390 (31%), Positives = 190/390 (48%), Gaps = 19/390 (4%)
Query: 5 DNEELNAIREGVRALCA---EFDAAYWRRIDEEKGFPEAFVKALTDAGWLSAMIPEAYGG 61
++E L+ +R+ R A E A W DE P ++ + D G +PE GG
Sbjct: 180 EDEALDMVRDQFRRFVADAVEPHAHDWHLKDEL--IPLPVIERMADMGVFGLTVPEEDGG 237
Query: 62 SGLGLAEASVILEEVNRCGGNSGTVHGQMYNMFTLLRHGSEAQKRL-YLPKLASGELRLQ 120
G+G V+ EE++R G++ + L+R G A++R +LP++ASGE+ L
Sbjct: 238 LGMGKLAMCVVTEELSRGYIGVGSLGTRAEIAAELIRMGGTAEQRARWLPRIASGEI-LP 296
Query: 121 SMGVTEPSTGTDTTKIKTTAIKRGDKYVINGQKVWISRVQHSDLMILLARTTPLAEVKKK 180
+ TEP+TG+D ++T A+ GD Y + G K WI+ SDLM LL RT P A +
Sbjct: 297 TAVFTEPNTGSDLGSLRTRAVPDGDLYRVTGAKTWITHGSRSDLMTLLVRTDPDAPGYR- 355
Query: 181 SEGMSIFLV--------DLREAIGNGLTVQPIANMVNHETNELFFDNLELPLDSLIGE-E 231
G+S+ L D A G P+ + E+ FD +P +L+G E
Sbjct: 356 --GLSMLLAEKPRGTEADPFPAEGMSGGEIPVLGYRGMKEYEIGFDGFAVPRGNLLGGVE 413
Query: 232 GKGFKYILDGLNAERTLIAAECIGDGRWFIEKASAYARDRVVFGRPIGQNQGVQFPIAEA 291
G+GFK ++ + R AA +G + +E YA++RV FGRP+ V +A
Sbjct: 414 GQGFKQLMATFESARVQTAARAVGVAQNAMELGLRYAQERVQFGRPLAAFPRVAGKLAWM 473
Query: 292 HIEIEAADLMRWRACEEYDSGKQAGASANMAKYLAAKASWEAANACLQTHGGFGFACEYD 351
+E A + + A E DS ++ A MAK LAA+ +W A+ +Q HGG G+A EY
Sbjct: 474 AVETMIARQLTYFAAREKDSDRRCDIEAGMAKLLAARVAWSNADNSVQIHGGNGYAVEYP 533
Query: 352 VERKFRETRLYQVAPISTNLILSYVAEHLL 381
V R + R+ + + + VA LL
Sbjct: 534 VSRVLCDARILNIFEGAAEIQAQVVARGLL 563