Pairwise Alignments

Query, 271 a.a., host specificity protein from Pseudomonas simiae WCS417

Subject, 297 a.a., Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Variovorax sp. SCN45

 Score =  132 bits (332), Expect = 9e-36
 Identities = 103/288 (35%), Positives = 144/288 (50%), Gaps = 27/288 (9%)

Query: 6   VRSALFVPGSRPERFSKALASGADAVIVDFEDAVEEPLKRQARDNLGAF-------LTAN 58
           +RS LFVP     + +K L S ADA+I+D EDAV    K  AR    AF       L A 
Sbjct: 7   LRSMLFVPADSERKLAKGLTSPADALILDLEDAVAPAHKVAARGTAAAFIAEHAPALQAR 66

Query: 59  PAAQVWVRINAPEHAEHFEDVAFCKAHPTVAGVLLPKVESASQVAVVA------------ 106
             AQ++VRIN  +      D+A   A P +AG++LPK  SA  +  VA            
Sbjct: 67  GGAQLYVRINPLDSGMAMHDLAAAVA-PGLAGIMLPKTNSADDIRRVAFCLDALETRAGM 125

Query: 107 --ATGKVIWPIIESARGLLAVAEIAH-APQVERLSFGGLDLALDLNLSSNSPAAQFALDQ 163
              T +++    E+A  +L +A      P++  +++G  DL+  +   SN  A       
Sbjct: 126 TPGTVRIVPVATETAPAMLTMASYTREVPRLAGITWGAEDLSAAIGAISNRDADGQLSPL 185

Query: 164 ARLA--LIVHSRAAGLVAPLDGVHPAIDDPEGLRRSIRHAYEMGFAGALCIHPKQVAVIH 221
             LA  L + + AA  V  +D ++    DP GL  S   A   GF G + IHP QVAVI+
Sbjct: 186 YTLANSLCLCAAAAAGVPAIDTLYADFRDPAGLAASCAVARRRGFRGRIAIHPDQVAVIN 245

Query: 222 QALAPSAEDLAWARRVVDAGA--HGAGAYQIDGQMVDAPVLLRAQRLL 267
           +A +PS  +LA ARRVV+A A    AG   +DG M+D P L +A+R L
Sbjct: 246 EAFSPSEAELAHARRVVEAFAAQPDAGTVGLDGAMLDMPHLKQARRTL 293