Pairwise Alignments

Query, 327 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 323 a.a., D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 8e-29
 Identities = 79/326 (24%), Positives = 155/326 (47%), Gaps = 8/326 (2%)

Query: 2   LKLSRALLCAATLFAAGLAQAADPIVIKFAHVVAENTPKGQGALLFKKLAQERLPGRVKV 61
           +   R LL A   FA  +A  A  + IKFA +     P         K  ++   G +  
Sbjct: 1   MTFKRKLLLAVLPFAFSVAMPASALDIKFAEIHPAGYPTVVAEQNMGKKLEDASNGEITF 60

Query: 62  EVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTQQVQIYDLPFLFNDLAAVDRFQA 121
           +++    L  + + +E   +G VQM   SL         V ++++PF+F D   + +   
Sbjct: 61  KMFAGGVLGSEKEVIEQAQIGAVQMTRVSLGIVGPVVPDVNVFNMPFVFRDHDHMRKIID 120

Query: 122 AQ-GKALLTAM--QDKNILGLAYWHNGLKQLSSNKALHEPKDARGLKFRVQASSVLEEQF 178
            + G+ +L  +   D N++ LA+   G + + + K +   +D +G+K RVQ + +  +  
Sbjct: 121 GEIGQEILDKITNSDFNLVALAWMDGGSRSIYTKKPVRSLEDLKGMKIRVQGNPLFIDMM 180

Query: 179 KAIRANPRKMSFAEVYQGLQTGTVNGTENTWSNYESQKVNEVQKYFTESNHGLIDYMVIT 238
            A+  N   M   E++  LQTG ++G EN           +  KY+T + H ++   V+ 
Sbjct: 181 NAMGGNGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQSAKYYTLTGHLILPEPVVM 240

Query: 239 NATFWNGLPPDIRSTLEQIMVEVTVEVNKQAEALNQSAKQKIIDAKTSEIIELTPEQRQL 298
           + T WN L P+ ++ ++++  E  +E     +A + ++++K+   K + +  +T +++  
Sbjct: 241 SKTTWNKLSPEQQALVKKVAREAQMEERALWDAKSAASEEKL---KAAGVEFITVDKKPF 297

Query: 299 WREAMRPVWQKFEGEIGADLIKAADA 324
           + +A   V +K+ G   ADL+K  DA
Sbjct: 298 Y-DATASVREKY-GAQYADLMKRIDA 321