Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 426 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

 Score =  292 bits (747), Expect = 2e-83
 Identities = 156/426 (36%), Positives = 247/426 (57%), Gaps = 9/426 (2%)

Query: 1   MAVLCLFLLLFVFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAIKLFETSDAYTFLAIP 60
           MA+  LF +  + + +G P+A  LGL+   ++L      V     +L    +A++ LAIP
Sbjct: 1   MAITILFGVFSLLLLVGTPVAFCLGLASLATVLYLDLPPVVVFQ-QLNSGMNAFSMLAIP 59

Query: 61  FFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGS 120
           FF+ +G  M  GG+A RLI  A + VGH+RGGL    V+A  LF  +SGS+ A  +A+G 
Sbjct: 60  FFIFAGDLMMRGGIADRLIGMAASLVGHLRGGLGQVNVVASTLFGGISGSAVADASAIGG 119

Query: 121 IAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYS--AATETSVGKLFMAGVIPG 178
           I +  M R GY K +   +  N+  + ++IPPS  M++YS  A    S+  LF AG++PG
Sbjct: 120 IMIPQMARHGYAKDYAVNVTVNSAIIALMIPPSHNMIIYSLSAGGTISIADLFTAGIMPG 179

Query: 179 LLLGLMLMIAIYIVARIKKLPAQPRATFREW---LTSARRAFWGLLLLVIILGGIYSGMF 235
           LLL   +MI  Y+VAR +  PA    TF  W   L S   A  G++L+ II GG+ SG+F
Sbjct: 180 LLLAAAMMITAYVVARNRGYPA---GTFPGWHAVLRSVVAAIPGIMLIGIIFGGVRSGIF 236

Query: 236 TPTEAAAVAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTE 295
           T TE++ +A +Y+  V   +Y++M   D  +  L + R   M++ +I  A  F  ++   
Sbjct: 237 TATESSCIAVIYALLVTTLVYREMHWADFVEATLGAVRTTAMVLLVIGTAASFGWLMAFL 296

Query: 296 QIPQEITAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPI 355
           Q+P+     + +    P   L+++N++LLI G+FM+ + +++I  PIF P+    GIDP+
Sbjct: 297 QVPKATIEMMQAISSNPYVILLLINIILLILGTFMDMAPMIIICTPIFLPLVKAFGIDPV 356

Query: 356 HLGIVMVVNMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPF 415
           H G+++++N  IGL  PPVG  LFV  AV  +T+G+ ++   P+    +  L++VTY+P 
Sbjct: 357 HFGVILILNAGIGLNTPPVGSVLFVGCAVGKITIGEAMKTIWPFFGASIAVLMIVTYVPA 416

Query: 416 ISLALP 421
           +SL LP
Sbjct: 417 VSLWLP 422