Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 426 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  311 bits (798), Expect = 2e-89
 Identities = 163/423 (38%), Positives = 260/423 (61%), Gaps = 3/423 (0%)

Query: 1   MAVLCLFLLLFVFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAIKLFETSDAYTFLAIP 60
           M  L L       + +G+P+A +LGLS  +    +      +L I++    + ++ +AIP
Sbjct: 1   MDALILLGSFIALILIGMPVAYALGLSALIGA-WWIDIPFQALMIQVAGGVNKFSLMAIP 59

Query: 61  FFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGS 120
           FF+L+GA M  GG+++RL+ FA   VG +RGGL++  ++A   F A+SGSS A  A+VGS
Sbjct: 60  FFVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGS 119

Query: 121 IAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAAT--ETSVGKLFMAGVIPG 178
           + +  M R GYP+ F   +  +     +L PPS   V+YS A     S+  LFMAGV+PG
Sbjct: 120 VLIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVVPG 179

Query: 179 LLLGLMLMIAIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPT 238
           LL+   LM+   I A+ +  P       ++ L     A WGL+ +VIILGGI SG+FT T
Sbjct: 180 LLMSACLMVLCLIFAKKRNYPKGEVIPLKQALKICADALWGLMAMVIILGGILSGIFTAT 239

Query: 239 EAAAVAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTEQIP 298
           E+AA+A +++ FV +FIY+D +  + PK++  + R   ++M +IA A  F +++T  QIP
Sbjct: 240 ESAAIAVLWAFFVTMFIYRDYKWSELPKLMHRTVRTISIVMILIAFAASFGYIMTLMQIP 299

Query: 299 QEITAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLG 358
            +IT   L+        L+ +N +LL+ G+ M+ + ++LIL PI  P+ + +G+DP+H G
Sbjct: 300 AKITTLFLTLSDNRYVILMCINAMLLLLGTVMDMAPLILILTPILLPVVLGIGVDPVHFG 359

Query: 359 IVMVVNMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPFISL 418
           ++M+VN+ IGL+ PPVG  LFV +AV  +++ +T++A LP+  +L + L+ VTY+P +SL
Sbjct: 360 MIMLVNLGIGLITPPVGAVLFVGAAVGKVSIEKTVKALLPFYGVLFLVLMAVTYIPALSL 419

Query: 419 ALP 421
            LP
Sbjct: 420 WLP 422