Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 433 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Variovorax sp. SCN45

 Score =  288 bits (736), Expect = 3e-82
 Identities = 152/424 (35%), Positives = 250/424 (58%), Gaps = 6/424 (1%)

Query: 7   FLLLFVFMFLGVPIAISLGLSGAV--SILMFSQDSVSSLAIKLFETSDAYTFLAIPFFLL 64
           F+ LFV M L VP+ +++GL G    S L+    ++  +      T   YTF  IP F+L
Sbjct: 11  FVALFVLMLLRVPVGMAMGLVGVTGYSYLVGPGPALKLVGQTSMRTVTDYTFGVIPMFML 70

Query: 65  SGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGSIAVA 124
            GA ++  GV++ L   AN+ +GH+RGGL +A V+AC  FAA+ GSS AT A   ++A  
Sbjct: 71  MGALVSVSGVSRELFKAANSMIGHLRGGLGVATVVACGGFAAICGSSVATAATFSAVAYP 130

Query: 125 GMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGLLLGLM 184
            M R  YP++F  G+I   GTLG ++PPS V+ VY+  T+  +GKLFMAG++PG+L   M
Sbjct: 131 EMRRFNYPQSFSTGVIAAGGTLGAILPPSTVLAVYAILTQQDIGKLFMAGIVPGILAMAM 190

Query: 185 LMIAIYIVARIKK--LPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPTEAAA 242
            ++ I I+ +++   LP      + E +   +  +  L+L V ++GG+Y G FTPTEA  
Sbjct: 191 YVMTIAIIVKLRPDWLPGGEIKPWSERVKDLKNVWAPLVLFVFVIGGLYGGFFTPTEAGG 250

Query: 243 VAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTEQIPQEIT 302
           V A   AF+   + + +      + LL + R A  +  ++  A+LF + LT  Q PQ++T
Sbjct: 251 VGA-SGAFILGLVRRKLDGPKIREALLSATRTAAAVFTVLIGALLFGYFLTITQSPQKLT 309

Query: 303 AWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGIVMV 362
            ++   G+   G L ++ ++ L+ G  M+  A++++  PI +P+ + LG DPI  G+++V
Sbjct: 310 EFLTGLGIGRYGVLALIMLMYLVLGCLMDAMAMIILTVPIIYPVIVHLGFDPIWFGVIIV 369

Query: 363 VNMEIGLVHPPVGLNLFV-TSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPFISLALP 421
           + +E+GL+HPPVG+N+FV  S V  ++     +  LP+++  +V L+++   P I+L LP
Sbjct: 370 MTVELGLIHPPVGMNVFVIKSVVKDVSFTTIFKGVLPFIVTDIVRLVILIAFPIIALWLP 429

Query: 422 HWLG 425
             +G
Sbjct: 430 TRMG 433