Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 433 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  303 bits (777), Expect = 5e-87
 Identities = 158/418 (37%), Positives = 259/418 (61%), Gaps = 3/418 (0%)

Query: 10  LFVFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAIKLFE-TSDAYTFLAIPFFLLSGAF 68
           +     LGVP+  ++ + G+V  L      + ++A +L   T  ++  LAIP F+L+   
Sbjct: 14  ILALSLLGVPVGQAM-IGGSVIYLYMKGMDMGTVAEQLLNGTYSSFLLLAIPLFILAATI 72

Query: 69  MTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGSIAVAGMVR 128
           M +G V  RL+ F NA VGH  GGLA   VL  ++FA++SGS+ A  A  G +    M +
Sbjct: 73  MGSGSVLDRLMKFCNALVGHFPGGLAQVNVLQSVVFASMSGSALADAAGSGKLMQVMMTK 132

Query: 129 SG-YPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGLLLGLMLMI 187
              Y   F A +   +  LG ++PPSI +V+Y+  + TS+G LF+AGV+PGLLLG + M 
Sbjct: 133 DNRYTAGFAAALTAASSVLGPILPPSIPLVLYALVSGTSIGYLFIAGVLPGLLLGAVQMG 192

Query: 188 AIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPTEAAAVAAVY 247
            ++ +A+ +  P +PR   RE     R AF  L+L V++LG +Y+G+ TPTEAA +AA Y
Sbjct: 193 LVHYLAKKRNFPVEPRVPLRELPRITREAFPALMLPVVLLGCLYTGITTPTEAAGLAAAY 252

Query: 248 SAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTEQIPQEITAWVLS 307
           +  +++ +Y+ +  +D    LL S R++I +  +IA A++F +V+T E IP  ++  + +
Sbjct: 253 ALLISVLLYRSIGWKDLYDALLSSARISISIGMLIAGALVFNYVITVENIPASLSGILST 312

Query: 308 EGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGIVMVVNMEI 367
             L+P+GFL++VN++LL+ G F+E S I+L++ P+  P A+ LG+DP+H G+V V+N+ I
Sbjct: 313 FDLSPLGFLLLVNLILLVLGCFLEGSTIILVILPVLLPTAVALGVDPVHFGVVAVLNIMI 372

Query: 368 GLVHPPVGLNLFVTSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPFISLALPHWLG 425
           GLV PP GL LF+ + +  ++L + +R  +P+L++++  L +VT  P + L LP   G
Sbjct: 373 GLVTPPYGLLLFMMTKIADISLMELVREMVPFLVVMIGALAIVTLWPDMVLFLPRMAG 430