Pairwise Alignments

Query, 184 a.a., polyisoprenoid-binding protein from Pseudomonas simiae WCS417

Subject, 193 a.a., Probable signal peptide protein from Variovorax sp. SCN45

 Score =  130 bits (328), Expect = 1e-35
 Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 2/178 (1%)

Query: 3   PVAVLALILAYVSSAQAVEYKDVNRTASQISFTYTQLGQRVYGTFSEFEGTLTFDTQQPE 62
           P+A+LA++   +++ +    K +    SQI F   Q+G  V GTF +F+  + FD ++PE
Sbjct: 9   PLALLAMLAPGMAATEPPAAKLI-ADKSQIVFVSKQMGVPVEGTFKKFDAQVAFDPKKPE 67

Query: 63  VGQAVLKIQLASIDAGSPDANDELQRASWFDTATYPVGVYESTGVTALGDNRYTISGNLT 122
            G  VL+I  AS   G P ++ EL +A WFD A +P   ++S+ + ALGD ++ ++G LT
Sbjct: 68  GGSVVLRIDTASAGFGIPMSDAELPKAPWFDAAHFPQATFQSSAIKALGDGKFEMTGKLT 127

Query: 123 IKGTTHPVKVDVVLKEHGG-IGVFDGEFVLKRGDFKIGEGEWAGNSVVSNDINIKFKM 179
           IKGT   V V V +   GG   V  G   ++R D+KIG+GEW   S+V+N++ ++FK+
Sbjct: 128 IKGTAKSVTVPVGIAPAGGNQAVATGSLTIQRLDYKIGDGEWTDTSMVANEVQVRFKL 185