Pairwise Alignments

Query, 441 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 496 a.a., putative regulator from Pseudomonas putida KT2440

 Score =  152 bits (385), Expect = 2e-41
 Identities = 127/464 (27%), Positives = 214/464 (46%), Gaps = 33/464 (7%)

Query: 6   YKSLVDTFAAAIRRGEMPPGMRLPTHRQLAADHGLALVTASRVYTELEAMGLVSGETGRG 65
           Y +L +   A I++G   PG RLP+ R L+ +HG++L T  + Y  LE  G+VS     G
Sbjct: 24  YLNLAEILGARIKQGLYRPGQRLPSVRALSEEHGVSLSTVQQAYRMLEDSGMVSPRPKSG 83

Query: 66  TFVREI----SLP----PGQGSGQMTVTAGMLDLNFNYPALP------GQADL------- 104
            FV +     +LP    P Q    ++    +L+L  + P         G  D+       
Sbjct: 84  YFVSDQRQLPALPAVSRPAQRPVDISQWEQVLELVRSTPRQDVVQLGRGMPDIDSPTLKP 143

Query: 105 LRTALRQLALSGDLEALLRYQPHAGRLHERAAFARHLLSRGLTVDPEQVLLTSGAQHGLA 164
           L  +L QL+   D+  L     H G L  R   AR +L  G  + P  +++T+G    L+
Sbjct: 144 LLRSLAQLSRRQDMPGLYYDNIH-GNLALREQVARLMLDSGCRLGPADLVITTGCHEALS 202

Query: 165 VTMMALLKPGDVIAVDALTYSGFKVLAETLHLEIVAIPVTP-TGPDLEALQNLCRKRPVR 223
            ++ A+ +PGD++AVD+ ++ G     + L ++ + IP  P TG  LEAL+    + P++
Sbjct: 203 CSIRAVCEPGDIVAVDSPSFHGAMQTLKGLGMKALEIPTDPVTGISLEALELALEQWPIK 262

Query: 224 AVYSMPTLHNPLGWVMDLAQRERLVSIARQHNLMIIEDAAYAFLAENAPPPVATLAPE-- 281
            +   P+ +NPLG++M  A+++ L+S+A+++++ I+ED  Y  LA   P P    + +  
Sbjct: 263 LIQITPSCNNPLGYIMPEARKKALLSLAQRYDVAILEDDVYGDLAYTYPRPRTLKSFDDD 322

Query: 282 -RTVYVGGLSKSVATGLRVGFVAAPSDWVKTLERAIMATTWNVPGVMSAVA---VAWIED 337
            R +     SK++A GLR+G+VA      + L    ++T         A+A    A    
Sbjct: 323 GRVLLCSSFSKTLAPGLRIGWVAPGRYLERVLHMKYISTGSTASQPQLAIADFIAAGHYQ 382

Query: 338 GTVAQLEAQKREDAQARQALAARVLKGLAYTSHP-SSYFLWLPLAEDARADQVAMTLQRD 396
             V ++ +Q +           R        S P   + LW+ L E     ++   L   
Sbjct: 383 PHVRRMRSQYQRGRDLMGDWVTRYFPAGTRVSRPQGGFMLWVELPEHLDTLRLNRALLEQ 442

Query: 397 NISVSTAEPFAVSAHVPHALRLALGSVAMPALHEALLSVRKVVE 440
            + V+    F+ S    H LR+   +   P +     SVRKV E
Sbjct: 443 GVQVAVGSIFSASGKFRHCLRMNFAARPTPQIE---ASVRKVGE 483