Pairwise Alignments

Query, 860 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  374 bits (960), Expect = e-107
 Identities = 194/434 (44%), Positives = 278/434 (64%), Gaps = 8/434 (1%)

Query: 415  TDVTEEVEARRRIEFLSQHDALTGLPNRTRLQAFLEGKFKAMPTSEQPLVMLSLDLDRFK 474
            TD++E   + +RI  L+ +DALT LPNRT  Q  L    +     +  +V++ LDLDRFK
Sbjct: 825  TDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFK 884

Query: 475  PVNDLLGHAAGDRVLNEVSSRLADCVRHGDLVARIGGDEFVLILTDAGTQD----EVEIL 530
            P+ND LGHAAGDR+L +++ RL  CV   D VAR+GGDEF L+L    T++        +
Sbjct: 885  PINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHV 944

Query: 531  CKRLIESIERTIRIDEQEVFVSASIGIAIAPNDAREAAELLRYADIALYEAKAAGRNTWR 590
             + ++ S+ R   ++ +E FV+ASIGIA++P D  E ++L++ AD A+Y AK  G+N ++
Sbjct: 945  AENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQ 1004

Query: 591  FYSGDMNARIIERRRLESDLRYGIKHGELRLYFQPRYRIADGQMVGAEALVRWQHPVRGL 650
            FY  +MNA  +ER  LESDLR+ ++  E  LY+QP++     ++ GAEAL+RW+HP RGL
Sbjct: 1005 FYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGL 1064

Query: 651  IAPDTFIPIAEESGLILALSDWVLETACACAAQWPEHLF----VSVNLSPTEFKRGNLVE 706
            + P  FIP+ EE GL++ + DWVL  A      W +       VSVN+S  +F  G L  
Sbjct: 1065 VPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGT 1124

Query: 707  RTRQALAVSGIDPARVELEITESVMLEDASGALEVMHTLKRLGLRIAMDDFGTGYSSLSY 766
            R    L  SG+ PA +ELE+TES+++ + + AL+++ +LK LGL IA+DDFGTGYSSL+Y
Sbjct: 1125 RIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNY 1184

Query: 767  LRAFPFDGLKIDRSFLTRLEESDDDKAIIHAIVGLGRALALTVTAEGIETAEHLAMLKSV 826
            L+ FP D LKIDR+F+  L E + D  I  AI+ +  +L L V AEG+ET E L  L+  
Sbjct: 1185 LKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREH 1244

Query: 827  ACEEGQGYFLSRPL 840
             C+E QGY   RP+
Sbjct: 1245 GCDEVQGYLFGRPM 1258



 Score = 31.2 bits (69), Expect = 4e-04
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 304 SQNALATSEARFRDVVEASSDWVWEIDGDWRFTYLSERFEGVTGLVRDAWIGA 356
           +  +L  SE R+R + E+ SD ++  D   +  Y+S   + V G   D WI A
Sbjct: 571 ASQSLRDSEQRYRMLAESISDVIFSTDNQLKLNYVSPSVQSVLGYQAD-WIFA 622