Pairwise Alignments

Query, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  256 bits (655), Expect = 2e-72
 Identities = 191/644 (29%), Positives = 316/644 (49%), Gaps = 18/644 (2%)

Query: 8   VLAFVSVAFIPVSLVAVISVMNARTEAVDQFIDGSTREIRQIDGNIRQFFDGTLQNVDQM 67
           ++  +  A +   LV VI    A     D+++         +D  +    +    ++++M
Sbjct: 12  LITSMGAALLASILVVVIIFTVALNRLTDRYL---------VDTALPASIEAIRNDIERM 62

Query: 68  ATDSVYTSVNTLKNYQPAD-AASQPMPAEAQTVIERFARYGATHPAAAILSIGLEDGTYA 126
               +  + +   N    D  A+   PA+A   IE        + A   L    E G Y 
Sbjct: 63  LGQPLVAAADIAGNTLLRDWLAAGEDPAQAPQFIEYLTAAKQRNHAFTTLFASTETGHYY 122

Query: 127 KWPD-DPQLAKYDPRTRPWYKAAMASPGKTVRTPAYYYDKDDVALVGTARALLENGKAKG 185
                D  L++ +P+ + W+   + S  +            ++AL    R   E GK  G
Sbjct: 123 NENGLDRTLSRSNPKDK-WFYGYIDSGAERFINIDIDGATGELALFIDYRVEKE-GKLVG 180

Query: 186 VFVVSVSLKNLTELVKSIKLGESGYVMLVE-DGVVLVDPRNAAHNFKPL-KGLGAAYAQL 243
           V  + + +  L++L+     GE G V LV  DG++ V P  A    + L + LGA  A+ 
Sbjct: 181 VAGMGLRMTELSKLIHDFSFGEHGKVFLVRNDGLIQVHPDAAFSGKRQLAEQLGADAAKG 240

Query: 244 AET---PQGSTDVVIDGVHYMANVWTSPGLGWRYIGLIEHREVMAEATRMTYLTALIVGV 300
             T      S+    DG  Y+A       L W  +  +   E+ A+  +  +LT+LI G 
Sbjct: 241 VMTGGESLRSSRFSRDGERYLALGLPLRDLNWTLVAEVPESEIYAQMHQAVWLTSLIGGA 300

Query: 301 LVLIFGLIAAAFSKVIVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDETAELAGWFNKFL 360
           + L+  L+    ++ +V+PI +V+  L  I  G GDL H L    +DE  +LA  FN+FL
Sbjct: 301 VALVSLLLVVLLARGLVRPIRRVTAALVQIGSGAGDLSHRLDDSRQDELGDLARGFNRFL 360

Query: 361 AAIRQLIQHIGAASANLQNASKVNSEVAHNMNEAAGRQREAVELVSTAFNEMVATANEVA 420
            + R LI  + + S  L+ A +  ++V  N  E +GRQ+E  E+V+TA +EM  T  ++A
Sbjct: 361 DSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEMGLTVQDIA 420

Query: 421 RSCSGAAESAENGHRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELEAGSRSINQILG 480
           R+   AA+++++      + ++ ++ +   +  +   + +++ A+ +L     S++++L 
Sbjct: 421 RNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVDEVLA 480

Query: 481 TIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGTLEN 540
            IR+I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+RT  ST E++Q++  L+ 
Sbjct: 481 VIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQQMIQRLKL 540

Query: 541 KTQEVTQKMGSCLDLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISAAAEEQHSVAEE 600
                   M +    + + V S +    S   I   V  I D N Q++ A EEQ +V EE
Sbjct: 541 GAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATEEQSAVTEE 600

Query: 601 INRHIQQIYDEARLVESLANSAQDDSGRLSNLSDELNGLVGRFK 644
           INR +Q I D AR   +     +++   L  L+D+L   +G F+
Sbjct: 601 INRTVQGISDLARETAAEVQGCREECQALRGLADDLARQMGGFR 644