Pairwise Alignments

Query, 1324 a.a., Nitrate reductase (EC 1.7.99.4) (from data) from Pseudomonas simiae WCS417

Subject, 926 a.a., Assimilatory nitrate reductase large subunit (EC:1.7.99.4) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  544 bits (1401), Expect = e-158
 Identities = 297/719 (41%), Positives = 419/719 (58%), Gaps = 28/719 (3%)

Query: 7   RSVCPYCGVGCGIVMQVENNKVVKVIGDTAHPTNFGRLCTKGTT----CGQAIADSGRME 62
           RS CPYCGVGCG++++   +++  V GD  HP N G+LCTKG T       AIA   R+ 
Sbjct: 7   RSTCPYCGVGCGVLIESVGSQITGVRGDPQHPANLGKLCTKGQTLHLTASPAIAQQTRLL 66

Query: 63  NAYVRQAREHDPVRIGIDKAISETARRLRHILDTHGPQALAFYVSGQMSLEAQYLINKLA 122
           +   R  R    + +  D A+     R   +++ HGP A+ FY+SGQ+  E  Y  NKLA
Sbjct: 67  HPMQRAQRGAPALPLAWDAALDLATDRFASVVERHGPDAVGFYISGQLLTEDYYAFNKLA 126

Query: 123 KGFVRTHHIESNSRLCMASAGSGYKLSLGADGPPGSYEDFDRADLFFVIGANMADCHPIL 182
           KG + T++I++NSRLCM+SA +GYKL+LGAD PP  Y+D + A   F++G+N A  HP+L
Sbjct: 127 KGLIGTNNIDTNSRLCMSSAVAGYKLTLGADAPPACYDDVNHAQCLFIVGSNAAFAHPVL 186

Query: 183 FLRMMDRVK--AGAKLIVVDPRRNATADKANLFLPIKPGTDLALLNGLLHLLVKNGHTDP 240
           F R+ +  K     K+IV DPRR  TA  A+L+LP+ PG+D+ L +GLLH+++  G  D 
Sbjct: 187 FRRIEEARKNNPAMKVIVADPRRTDTAGLADLYLPLLPGSDVMLFHGLLHIMLWEGWIDS 246

Query: 241 AFIAAFTDGWEAMPAFLEDYSPEHVAVITGLAEADIRQAADWIGQAAEWMSCWTMGLNQS 300
            +IAA T G++A+ A + +++PE VA   GL   D+  AA W   A   +S +  GLNQS
Sbjct: 247 GYIAAHTSGFDALKALVREHTPERVAQACGLRREDLFTAAKWFANAPATLSLYCQGLNQS 306

Query: 301 THGTWNTNALCNLHLATGAICRPGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSVLVEAD 360
           + GT     L NLHLATG I +PG+GPFSLTGQPNAMGGRE+G +   L   R +     
Sbjct: 307 SSGTAKNATLINLHLATGQIGKPGAGPFSLTGQPNAMGGREVGGLANLLSAHRDLANPEH 366

Query: 361 RAFIEDLWQIPPDSLPRQAGAGTVGMFEQMAAGQIKACWIICTNPVASVPNRQTVIKGLQ 420
           RA +  LW +P  S+P + G   V +FE  A GQ+KA WI CTNP  S+P++ TV + L 
Sbjct: 367 RAEVAALWGVP--SVPEKPGLSAVELFEAAADGQVKALWIACTNPAQSMPDQATVRRALA 424

Query: 421 TAELVITQDAFLDTETNRYADILLPGALWAEAEGVMINSERNLTLMQKAVDAPGETLPDW 480
            AE V+ Q+A+    T  +AD+LLP   W E +G + NSER ++ ++ AV APG+   DW
Sbjct: 425 RAEFVVVQEAYATAATCAFADLLLPATTWGEKDGTVTNSERRISRVRAAVPAPGQARHDW 484

Query: 481 QIIARVASEM------GFAEAFTYASASEVFEEIKRAWNPKTGYDIRGASYPRLREK-PL 533
           +I    A  +      G    F Y  A  ++ E + +   +   DI G SY  L+++ P 
Sbjct: 485 RIAVDFAQRLEARWRPGQPTLFPYPDAESLWLEHRESTRGR-DLDITGLSYAMLQQQGPQ 543

Query: 534 QWPCASDTAADRNPIRYVDKGPVTFATDNGKAQFLARPHMPPAELPDEAFPFVLNTGRVQ 593
           QWP  +  +  R   R  + G   FAT +GKA+F A P +P AE  +  +PF L TGR++
Sbjct: 544 QWPLKAGESQGRE--RLYEDG--VFATPDGKARFAALPFVPLAEPRESRYPFSLTTGRLR 599

Query: 594 HQWHTLTKTGKVATLNKLNPGPFVELHAEDAARLGIKDKDRVEIRSRRGHAVLPAVITDR 653
            QWH +T+TG +  L      P V+LH +D  R G+KD D V + S+RG  ++PAV +D 
Sbjct: 600 DQWHGMTRTGTLGRLFGHVAEPSVQLHPQDMERRGLKDGDLVHVTSKRGSILVPAVASDE 659

Query: 654 VRPGNCFAPFHWNDVF-------GDNLA-INAVTNDAVDPISLQPEFKCCAVALARVEL 704
           +     F   HW   +       G+ LA +NA+T  A  P S QPE K  AV + + EL
Sbjct: 660 IGLSQAFIAMHWGAEYLSGLSSTGEPLAGVNALTTSAYCPTSKQPELKHAAVKVLKAEL 718