Pairwise Alignments

Query, 551 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  242 bits (618), Expect = 3e-68
 Identities = 179/505 (35%), Positives = 268/505 (53%), Gaps = 22/505 (4%)

Query: 51  DARTRLANTLNDAAAQRAI-ALRNIALNSNVTARGQQRGAIAANEQMVASSLAALRQATD 109
           D   +LA+ L D   ++A+ A+ N+        + + R   A +    ASSL A  QA  
Sbjct: 149 DVLAQLASDLPDQEDEKALDAVENLR---QAIEQAEDR---AQSPAWAASSLDAYAQA-- 200

Query: 110 NHGDVSPKARELFSTIEQVESRYEPVAHTIAEHLFKGENDEALRMVSEQCTPLLAE--LT 167
               V+   R L   + Q      PV  T  ++          R+   Q T   ++  L 
Sbjct: 201 ----VNDAERNL--ELAQAAVAKLPVDSTALKNAVLEIRTRLTRLKEAQLTTEKSQNQLE 254

Query: 168 QAIGEYLRYTNQRADLQVSENDEHYLSQRNLLLAITALAVLLAAVLGYVISRNLLRALGA 227
           Q + + L  ++  +  Q    D      R   L +TA A+LL  +  +VI+  ++  L  
Sbjct: 255 QQLDQLLGQSDLLSQDQTQRRDHEAEQARTQTLGVTAAALLLGVLAAWVIAGQIVTPLRK 314

Query: 228 EPSELNQLAQRVANGDLRASERTIEPPQ-ASIMAALLSMQENLRDMTKGINLSSQTVAES 286
             S    +A R+A GDL    +T    +   +  ++  M  NLR +   I+ ++Q +A +
Sbjct: 315 ALS----VANRIAEGDLSHEVQTRRKDELGQLQHSMTQMTLNLRGLIGNISDNAQQIASA 370

Query: 287 SQELSQSSLRNAESVAMAQCEVEQIVTAVHQMAATVQDVARNAESAASAASEADSAALYS 346
           ++ELS  + +    V+  + E EQ+  A++QM AT Q+VAR+AE A+ AA +A+      
Sbjct: 371 AEELSTITEQTRAGVSNQREETEQVAAAMNQMLATAQEVARHAEQASIAAGQANHQTDLG 430

Query: 347 QQKAKDAVNMISELAETIEQSNMAMGRLKNETGNIGGVLEVIKSVADQTNLLALNAAIEA 406
            Q   D V  I  LA  + +S+ AM  L+ E+  IG VL+VIKSV+ QTNLLALNAAIEA
Sbjct: 431 DQVVTDVVAQIEHLAHEMARSSQAMLALQRESQKIGSVLDVIKSVSQQTNLLALNAAIEA 490

Query: 407 ARAGEAGRGFAVVADEVRSLAQRTQKATSEIEGLIASLQKIADETSQHMQRCKSSSAQSV 466
           ARAGEAG+GFAVVADEVRSLAQRTQ++  EIE LI  L     + +  +   ++ +  SV
Sbjct: 491 ARAGEAGQGFAVVADEVRSLAQRTQQSAEEIEELIGGLHSGTQQVADILDYSRTLTDNSV 550

Query: 467 SGVSEAGDAVSTIVTMIERINGMNHQIAAAAEQQSTVAEQISRGIVTVSESAEQSAAAFR 526
                AGDA+S I   +  I  MN QIAAAAE+QS VAE+I+R ++ V +++EQ+AAA  
Sbjct: 551 GLARNAGDALSEIARTVLVIQEMNPQIAAAAEEQSAVAEEINRSVLKVRDASEQTAAASE 610

Query: 527 SAQQESEGLARTSVTLRENISRFQL 551
                S  LAR    L++ + +F++
Sbjct: 611 QTAAASIELARLGTDLQQCVGQFKV 635