Pairwise Alignments

Query, 551 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  266 bits (681), Expect = 1e-75
 Identities = 179/496 (36%), Positives = 259/496 (52%), Gaps = 18/496 (3%)

Query: 57  ANTLNDAAAQRAIALRNIALNSNVTARGQQRGAIAANEQMVASSLAALRQATDNHGDVSP 116
           A+++  A  Q     R   L   +  RG      +ANEQ     L A    TDN     P
Sbjct: 161 ADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLP 220

Query: 117 KARELFSTIEQVESRYEPVAHTIAEHLFKGENDEALRMVSEQCTPLLAELTQAIGEYLRY 176
                    E     Y        + +                T   AE+T    + ++ 
Sbjct: 221 SEDARLQQFENAVLAYRDAVRQFRDAV-------------ANITTSRAEMTVQGADIVKR 267

Query: 177 TNQRADLQVSENDEHYLSQRNLLLAITALAVLLAAVLGYVISRNLLRALGAEPSELNQLA 236
           ++    +Q+   D      R+L    T LA+L+  +   +I+R + R L     +     
Sbjct: 268 SDALYQIQLERRDIESTQARSLQAIATLLALLVGVLAAVLITRQITRPL----QDTLVAV 323

Query: 237 QRVANGDLRASERTIEPPQASIMA-ALLSMQENLRDMTKGINLSSQTVAESSQELSQSSL 295
           +++A+GDL    R     +  ++   +  M   LR++  GI      +A +++ELS  + 
Sbjct: 324 EKIASGDLTQHMRVTRRDELGVLQQGIARMGTTLRELISGIRDGVTQIASAAEELSAVTE 383

Query: 296 RNAESVAMAQCEVEQIVTAVHQMAATVQDVARNAESAASAASEADSAALYSQQKAKDAVN 355
           + +      + E +Q+ TA+H+MAATVQ+VARNAE A+ AA+ AD  A    +   +A+ 
Sbjct: 384 QTSAGANSQKVETDQVATAMHEMAATVQEVARNAEQASHAATGADDEARAGDRVVGEAIG 443

Query: 356 MISELAETIEQSNMAMGRLKNETGNIGGVLEVIKSVADQTNLLALNAAIEAARAGEAGRG 415
            I  LAE + +S  AM  L+ E+  IG V++VIKSVA+QTNLLALNAAIEAARAGEAGRG
Sbjct: 444 QIERLAEDMHRSTEAMNLLQQESQKIGSVMDVIKSVAEQTNLLALNAAIEAARAGEAGRG 503

Query: 416 FAVVADEVRSLAQRTQKATSEIEGLIASLQKIADETSQHMQRCKSSSAQSVSGVSEAGDA 475
           FAVVADEVR LAQRTQK+T EIE LIASLQ    + +  MQ  ++ +  SV    +AG +
Sbjct: 504 FAVVADEVRGLAQRTQKSTEEIEELIASLQHGTQQVANAMQGSRALTDSSVELARKAGSS 563

Query: 476 VSTIVTMIERINGMNHQIAAAAEQQSTVAEQISRGIVTVSESAEQSAAAFRSAQQESEGL 535
           + +I + +  I  MN QIAAAAEQQS VAE+ISR I+ V + +EQ+AAA       S  L
Sbjct: 564 LESITSTVSSIQSMNQQIAAAAEQQSAVAEEISRSILNVRDVSEQTAAASDETAASSVEL 623

Query: 536 ARTSVTLRENISRFQL 551
           AR    L+  +S+F++
Sbjct: 624 ARLGGQLQTLVSQFRV 639