Pairwise Alignments

Query, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  445 bits (1144), Expect = e-129
 Identities = 250/525 (47%), Positives = 339/525 (64%), Gaps = 8/525 (1%)

Query: 1   MRNNQPVTQREISLAPSQKLISATDVRGVITYCNDAFVDISGFERADLIGAPQNIVRHPD 60
           MR N PVT+ E +    Q+LIS TD+   ITYCNDAFV ISGF   +L+G P N+VRHPD
Sbjct: 1   MRMNLPVTEHERTFPGDQRLISTTDLDSRITYCNDAFVAISGFTYDELVGQPHNLVRHPD 60

Query: 61  VPPAVFAHMWGALKQGLPWMGIVKNRSKNGDHYWVNAYVTPIFDGSKVVGFESVRVKPTA 120
           +PPAVF HMW  +KQG PWMGIVKNR+KNGD+YWV+AYVT I++  ++ G+ESVR  PT 
Sbjct: 61  MPPAVFGHMWETIKQGKPWMGIVKNRAKNGDYYWVSAYVTAIYEQGRISGYESVRSVPTR 120

Query: 121 DEIRRAQALYRRISQGKPGVPRQDAWLPAAINCVPYVATGLTGSLAGMFLSAPVAIAVAV 180
           ++IRRA+ALY R+  G+  VP          +  P +  GL  +   ++L    A+AV +
Sbjct: 121 EQIRRAEALYARLRDGRSPVPWAARLGHGLGHGWPLIGAGLLSAAGYLWLPPYAALAVLM 180

Query: 181 AVAVPVGVLCSRW---RQGSTLRLLHGVEPST-SDALIAQMYSDARGPQARLETAFLSQN 236
           A  +    L   W   RQ   +R      P   +  L+A  YSD  G + +L+ A +S+ 
Sbjct: 181 ASLL----LAWYWVEHRQNQAIRRTLAEHPKAFTSPLVALTYSDNPGLKGQLDLAIISEE 236

Query: 237 ARLKTCLTRLQDSAEQLSALAGQSDQLASASSKGLDRQRVETEQVSAAVNQMAATTQEVA 296
           ARL+T LTRL D+   + + A QS  L+ A ++ LDRQR ET+Q + A+ QMAAT Q+V 
Sbjct: 237 ARLQTALTRLVDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVT 296

Query: 297 SHVQRTADATQQANVLTGRGREVARDTREAIERLSAVVSETGVTVAQLAKDSNEIGSVVD 356
            +VQ TA A   A+ L  +G E+A  + + +  +S  V++ G  V  LA+ +  IGSVVD
Sbjct: 297 HNVQSTAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGSVVD 356

Query: 357 VIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAQRTSQSTTQIHGLITQLQA 416
           VI  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LAQRT  ST +IH +I  L+A
Sbjct: 357 VITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHIIASLRA 416

Query: 417 SSNNAVQSMENGQRQAQEGVAWVLEADQALVGISEAVSHITDMTTQIAAATEEQSAVAEE 476
            +  AV +   G++ +++ V  V     AL GI+ AVS IT M+ Q+A A+E+QS VAE+
Sbjct: 417 GAERAVSTASRGEQISRDSVHSVEAVQAALSGIAVAVSRITGMSQQMATASEQQSHVAED 476

Query: 477 ISRNITTIAELADQTSLQAHQSTDLSKELTNTASTQYALVERFNR 521
           I++ I  IA+L DQ++ QA Q  ++S++L   A   ++L ERFNR
Sbjct: 477 INQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAERFNR 521