Pairwise Alignments

Query, 497 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  183 bits (464), Expect = 2e-50
 Identities = 115/311 (36%), Positives = 169/311 (54%), Gaps = 4/311 (1%)

Query: 185 VTTQISAQTAQGEGKVHMSLAKRFDHFLQQITHLIDGVARDSHGLGQLGQELASASGTLE 244
           +T  +  Q     G++  S+ +      Q +  LI G+      +    +EL++ +    
Sbjct: 330 LTQSLQVQRRDELGQLQASMHR----MTQGLRELIGGIGDGVTQIASAAEELSAVTEQTS 385

Query: 245 KGARHQLAEITQMTGSMQRMEDAMGHIAVHVEQAVDHAGKASQQILRGQESVGRAQQEIT 304
            G  +Q  E  Q+  +M +M   +  +A + EQA + A  A QQ   G   VG A  +I 
Sbjct: 386 AGVNNQKVETDQVATAMNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIE 445

Query: 305 QLASRLNGTHETVQGLAVQAEQIGTVLDVISGIANQTNLLALNAAIEAARAGEQGRGFAV 364
           +LAS +  + E +  L  ++++IG+VLDVI  +A QTNLLALNAAIEAARAGE GRGFAV
Sbjct: 446 RLASEVVNSSEAMNLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAV 505

Query: 365 VADEVRNLAQRTAVSTQEIKTIIESLQHGSRQAVEAMHDSRQGVDRCVEDSQVAVDMLRA 424
           VADEVR+LAQRT  ST+EI+ +I  LQ G+++    M +SRQ  D  VE ++ A   L  
Sbjct: 506 VADEVRSLAQRTQQSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLET 565

Query: 425 VGSDIAQIDDLNGRIVTTTREQTEANLEIVGRLQSVQSIAQSTANDVETLARSSEQLPPI 484
           +   ++ I  +N +I T   EQT    EI   + +V+ I+  T+   E  A SS +L  +
Sbjct: 566 ITRTVSSIQAMNQQIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARL 625

Query: 485 AVRLDALGRRF 495
              L  L  RF
Sbjct: 626 GTHLQGLVGRF 636



 Score = 26.2 bits (56), Expect = 0.004
 Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 17/175 (9%)

Query: 229 LGQLGQELASASGTLEKGARHQLAE------------ITQMTGSMQRMEDAMGHIAVHVE 276
           L  L +++    G +E+ A HQ  E              ++  + QR E +   +    +
Sbjct: 86  LSNLDRQVQLMLGQIEQPADHQRLEQQREAVRIYQQAFNELKQADQRREASRDVLGSSAD 145

Query: 277 QAVDHAGKASQQILRGQESVGRAQQEITQLASRLNGTHETVQGLAV--QAEQIGTVLDVI 334
           +AVD  G+  + +L+G        Q    +++ L      V+G      A+   T L  I
Sbjct: 146 KAVDLIGRVQRSLLQGANI--NQYQHAVDVSALLQQARFQVRGYTYSGNADYQQTALKAI 203

Query: 335 -SGIANQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQRTAVSTQEIKTIIE 388
              +A    L A   A  AA   +         D V         S Q ++ ++E
Sbjct: 204 DQALAELRALPAKVPAEHAASLDDAATAMGGYRDAVTQFGNAQLASEQALQRMVE 258