Pairwise Alignments

Query, 326 a.a., integrase from Pseudomonas simiae WCS417

Subject, 326 a.a., integrase from Pseudomonas simiae WCS417

 Score =  483 bits (1242), Expect = e-141
 Identities = 239/325 (73%), Positives = 269/325 (82%)

Query: 1   MALVGRRNGRNFGYGRQLSYAGPQALKDLFGDGHYGTVKAHSDRWQAFVRWCRSEDGPGF 60
           MA V +R GRNFG+GRQLSYAGPQALKDLF DGH+ TVKAHSDRWQAFV WCRSEDGP  
Sbjct: 1   MARVCKRAGRNFGFGRQLSYAGPQALKDLFCDGHFATVKAHSDRWQAFVNWCRSEDGPRL 60

Query: 61  NDARQIDRQTLLDYAGHLRQQVEQGELAIATAQNRLSSVNRTMAALRGDQYVKVVSPSKA 120
           NDARQIDR+ L+ YAGH+R+QV+QG + IATAQNRLSSVNRTMAALRGDQYVK+ SPSKA
Sbjct: 61  NDARQIDREILMRYAGHVREQVDQGNVGIATAQNRLSSVNRTMAALRGDQYVKIPSPSKA 120

Query: 121 LGMRRTSVRHSVPQGQDREHVKRIVEVLCEHQQPRAAAIAQLTRATGMRLREAILADLPR 180
           LG++R+ VR   PQGQDR  +++I + L EH Q R +AI  L R TGMRLRE ILADLPR
Sbjct: 121 LGLQRSGVRSEAPQGQDRVQIEQIAQALSEHGQQRVSAIVYLARETGMRLREVILADLPR 180

Query: 181 LKREAEQYGKINIQDGTKGGRSGASAPRWITADDHIRDALRFAEQISPDGSRNLLAPNES 240
           L+REA Q GKINIQDGTKGGRSGASAPRWI   D +RDAL  A + SP+GSRNLL P+ES
Sbjct: 181 LQREARQLGKINIQDGTKGGRSGASAPRWIAVTDQVRDALYRASEASPNGSRNLLTPDES 240

Query: 241 YLDFQQRIVRPARDILHKHNLKGFHELRAAYACERYEQITHHPAPVNGGRCYQLDRRLDK 300
           Y  F + +VRPARDILH+H LKGFHELRAAYACERYEQ+T   APVNGGR ++ DR LD+
Sbjct: 241 YKVFLRAVVRPARDILHEHGLKGFHELRAAYACERYEQLTGFSAPVNGGRGHREDRVLDR 300

Query: 301 NARVQISDELGHGRIDVVSAYIGGR 325
            AR QIS ELGH RIDVVSAYIGGR
Sbjct: 301 QARQQISHELGHNRIDVVSAYIGGR 325