Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  204 bits (519), Expect = 1e-56
 Identities = 177/657 (26%), Positives = 300/657 (45%), Gaps = 59/657 (8%)

Query: 19  VLVLFVLTVVGIGQLVAPTLRHTEEQVVLNRIAEVAEQIQGELNKVQSQQRSITQTVPLL 78
           V++ F L  +    L   T++   E  +       A  +Q  L+       S+TQ V   
Sbjct: 17  VVLAFALFTLYNDYLQRSTIKQNLESSIQQSGELTASSVQNWLSGRILVLESLTQNVAHQ 76

Query: 79  DSDAIDKVLPGLVDQYGELKVFGGGIWPLPNQRTPGRNKHSTFWHRDASGKLAVNTFWNS 138
            S A    LPGLVDQ      F         Q T     +  F  R  +           
Sbjct: 77  GSGAD---LPGLVDQPAFTSNF---------QFTYVGQTNGVFTQRPDA----------- 113

Query: 139 DPAPNYYD---QSWYKGGLASPRGQCA--WAAAYKDDASQEPRTNCAMAIQRDGVPYGVA 193
              P+ YD   + WYK  +A+ +      + AA             AM ++++G   GV 
Sbjct: 114 -KMPDGYDPRQRPWYKQAVAADKPMLTPPYMAAVGGQI-----VTIAMPVKKNGELLGVV 167

Query: 194 TIDVTLGFFNDLVASKEKDIGGQMLIVEGDGKIISNSTRISSPVVLKNISEL-TGTSAFA 252
             D++L     ++ S +    G   +V  DG++I +  +     V+KN+ ++  GT    
Sbjct: 168 GGDLSLQTLVKIINSVDFGGIGHAFLVSSDGQVIVSPEQDQ---VMKNLKDIYPGTQVRI 224

Query: 253 AQVSKALAQRDQALQRSEFDNQGVASTFYMRPIAGTP---WFLATALPTALITAQRDDVL 309
            +VS+ +    Q    S              PI+G P   W++  ++      A      
Sbjct: 225 EKVSQDVVLNGQDRILS------------FTPISGLPGADWYIGLSIDKDKAYAPLGKFR 272

Query: 310 GTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDELGA 369
            +  +  +  V+ + +L    I+ L++ + ++   +  ++ G+ DLTRR+ + ++DE G 
Sbjct: 273 TSALIAMLIAVVAIAVLLSLLIQVLLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGE 332

Query: 370 IGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILV---RHASETDQTVTA 426
           +G + N+F+  +   I EV+ AT  +    +  QR  A +N  ++     ++ T+    A
Sbjct: 333 VGSAFNQFVERIHASISEVSSATRQVH---DLSQRVMASSNASIIGSDEQSARTNSVAAA 389

Query: 427 ITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVENM 486
           I E+ +    +A+NAA+ +     A+E AD  R VV +   ++S L  ++S +   +E +
Sbjct: 390 INELGAATQEIARNAADASQHASGASEQADDGRKVVEQTILAMSELSQKISLSCTQIETL 449

Query: 487 RQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQAST 546
                 I   L VI  I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ S 
Sbjct: 450 NASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESA 509

Query: 547 SQINEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIA 606
            +I++M+T L  G   +V  M  +Q S + + +   +    L  +   +  I+ ++  +A
Sbjct: 510 EEIHKMITSLQVGSREAVTTMNASQTSSEESVEVANQAGERLVSVTQRIVEIDGMNQSVA 569

Query: 607 TAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
            A E+Q+AV E +N  + QI  + ++ V + + T  +  +L     R+  L+  FK+
Sbjct: 570 AATEEQTAVVETLNVDINQINLLNQQGVANLNETLKDCDALSQQANRLKQLVDSFKI 626