Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  208 bits (530), Expect = 5e-58
 Identities = 159/537 (29%), Positives = 261/537 (48%), Gaps = 39/537 (7%)

Query: 142 PNYYD---QSWYKGGLASPRGQCAWAAAYKDDASQEPRTNCA-MAIQRDGVPYGVATIDV 197
           P  YD   + WY  G A+  GQ    A Y+        T    +  +R+G   GV   DV
Sbjct: 131 PAGYDPRQRPWY--GAAANAGQTVLTAPYQGAVGGLMVTIATPVKSKRNGELIGVVGGDV 188

Query: 198 TLGFFNDLVASKEKDIGGQMLIVEGDGKIISNSTRISSPVVLKNISELTGTSAFAAQVSK 257
           TL    +++ S +    G   + + +G++I +  +     V+KN+ ++   S     +  
Sbjct: 189 TLDTLVEIINSVDFGGIGHAFLADANGQVIVSPNKDQ---VMKNLKDIYPGS----NLRV 241

Query: 258 ALAQRDQALQRSEFDNQGVASTFYMRPIAGTP---WFLATALPTALITAQRDDVLGTLAL 314
           A   +D  L     D Q    +F   P+AG P   W++  ++        RD     L+ 
Sbjct: 242 AAGMQDVTL-----DGQDRIISF--APVAGLPSAQWYIGLSI-------DRDKAYAALSQ 287

Query: 315 LQIPMVLLLVLLAVYAIRQLV--------QRMKSLKTNIDALSTGDADLTRRITIRAEDE 366
            +   ++ + L+AV AI  L+          + ++   +  ++ G+ DLTRR+ ++ +DE
Sbjct: 288 FRTSAIIAM-LIAVAAIAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDE 346

Query: 367 LGAIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVTA 426
            G +  S NRF+  +   I EV+ AT  +    E++   S  +       +  T+    A
Sbjct: 347 FGELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAA 406

Query: 427 ITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVENM 486
           I E+ +    +A+NAA+ +     A+E A   R VV EA ++++AL   +S +   +E +
Sbjct: 407 INELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETL 466

Query: 487 RQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQAST 546
                 I + L VI  I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ S 
Sbjct: 467 NASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESA 526

Query: 547 SQINEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIA 606
            +I+ M+T L  G   +V  M  +Q S +       +    L  +   +  I+ ++  +A
Sbjct: 527 EEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVA 586

Query: 607 TAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
           TA E+Q+AV E +N  + QI  + ++ V++ + T  +   L    GR+  L+G F++
Sbjct: 587 TATEEQTAVVESLNLDITQINALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643