Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  210 bits (534), Expect = 2e-58
 Identities = 158/543 (29%), Positives = 261/543 (48%), Gaps = 29/543 (5%)

Query: 127 SGKLAVNTFWNSDPAPNYYDQSWYKGGLASPRGQCAWAAAYKDDASQEPRTNCAMAIQRD 186
           +G  A   F N DP      + WY+  +A+P G+     AY   A      +    +   
Sbjct: 126 TGWPAGQKFVNYDPRT----RPWYQLAMANP-GKTMRTGAYYWAADDAVLVSTVRTVANQ 180

Query: 187 -GVPYGVATIDVTLGFFNDLVASKEKDIGGQMLIVEGDGKIISNSTRISSPVVLKNISEL 245
            G P GV  IDV+L    ++V   +    G +++VE +G ++ +    +     K +   
Sbjct: 181 LGNPGGVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHN--FKQLGSF 238

Query: 246 TGTSAFAAQVSKALAQRDQALQRSEFDNQGVASTFYMRPIAGTPWFLATALPTALITAQR 305
               A  A+  K L          E +  GV     + P     W     +  + +    
Sbjct: 239 GDGYAKLAKAGKGLV---------EVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQTT 289

Query: 306 DDVLGTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAED 365
             +   + ++ + +  L  ++     + +V+ + S+   ++ ++ G+ DLTR + IR  D
Sbjct: 290 TRLTWLIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRD 349

Query: 366 ELGAIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVT 425
           E   + +  N+F+  ++++I  +  A   + S+     R S+   +   R     D   T
Sbjct: 350 ETAQLANWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVST 409

Query: 426 AITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVEN 485
           A  EM +TA+ VA++ ++ A       + A   +  +  A +SV  L  E+  +  S++ 
Sbjct: 410 AFHEMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQ 469

Query: 486 MRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQAS 545
           + +D+  I   LG I +IA QTNLLALNAAIEAARAGEQGRGFAVVADEVRALA RT  S
Sbjct: 470 LERDSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADS 529

Query: 546 TSQINEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLD---EMAGSVSHINNLS 602
           T++I+ +L  L    S +    E   AS + +  + +R+    D   ++  SV  I +++
Sbjct: 530 TAEIDGLLGNL---ASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMN 586

Query: 603 TQIATAAEQQSAVTEEINRSMVQIR---QMVEELVQSGHATETNTQSLLDANGRVIALMG 659
           TQIATAAE+Q  V E+INR + QI    Q+V EL Q   A   +++SL   +  +  L+ 
Sbjct: 587 TQIATAAEEQHQVAEDINRHISQIHGDAQLVAELAQ---AARQDSESLAGLSNELDTLVR 643

Query: 660 RFK 662
           RF+
Sbjct: 644 RFR 646