Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  244 bits (623), Expect = 9e-69
 Identities = 161/545 (29%), Positives = 269/545 (49%), Gaps = 19/545 (3%)

Query: 131 AVNTFWNSDPAPNYYDQSWYKGGLASPRGQCAWAAAYKDDASQ------------EPRTN 178
           A  T + S    +YY+++     L+    +  W   Y D  ++            E    
Sbjct: 108 AFTTLFASTETGHYYNENGLDRTLSRSNPKDKWFYGYIDSGAERFINIDIDGATGELALF 167

Query: 179 CAMAIQRDGVPYGVATIDVTLGFFNDLVASKEKDIGGQMLIVEGDGKIISNSTRISSPVV 238
               ++++G   GVA + + +   + L+        G++ +V  DG I  +     S   
Sbjct: 168 IDYRVEKEGKLVGVAGMGLRMTELSKLIHDFSFGEHGKVFLVRNDGLIQVHPDAAFSGK- 226

Query: 239 LKNISELTGTSAFAAQVSKALAQRDQALQRSEFDNQGVASTFYMRPIAGTPWFLATALPT 298
            + ++E  G  A     +K +    ++L+ S F   G        P+    W L   +P 
Sbjct: 227 -RQLAEQLGADA-----AKGVMTGGESLRSSRFSRDGERYLALGLPLRDLNWTLVAEVPE 280

Query: 299 ALITAQRDDVLGTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRR 358
           + I AQ    +   +L+   + L+ +LL V   R LV+ ++ +   +  + +G  DL+ R
Sbjct: 281 SEIYAQMHQAVWLTSLIGGAVALVSLLLVVLLARGLVRPIRRVTAALVQIGSGAGDLSHR 340

Query: 359 ITIRAEDELGAIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHAS 418
           +    +DELG +    NRF+   +++IGEV   +  +  ++EQ+ +   +T +   R   
Sbjct: 341 LDDSRQDELGDLARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQE 400

Query: 419 ETDQTVTAITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSS 478
            T+   TA+ EM  T   +A+NA + A  +Q A + A ++R VV  +   +  + G++  
Sbjct: 401 MTEMVATAVHEMGLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGK 460

Query: 479 ATHSVENMRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 538
           A  +V  +  + A + E L VI +I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 461 AADAVSQLADEVASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTL 520

Query: 539 AARTQASTSQINEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHI 598
           A RTQ ST ++ +M+ RL  G  S+V++M+  Q +  S  +++ R    L  +   V HI
Sbjct: 521 ARRTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHI 580

Query: 599 NNLSTQIATAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALM 658
           ++++ Q+ATA E+QSAVTEEINR++  I  +  E            Q+L      +   M
Sbjct: 581 SDMNHQVATATEEQSAVTEEINRTVQGISDLARETAAEVQGCREECQALRGLADDLARQM 640

Query: 659 GRFKV 663
           G F++
Sbjct: 641 GGFRL 645