Pairwise Alignments

Query, 303 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  176 bits (445), Expect = 8e-49
 Identities = 114/293 (38%), Positives = 153/293 (52%), Gaps = 4/293 (1%)

Query: 1   MDRFNAMRVFTRIVELRGFAKAADSLQLPRASVTVLIKQLEAHLGVQLLQRTTRQVSPTL 60
           MD   A++VF        FA AA  + L  A+V+  I QLEAHL V+L+ RTTRQ+S T 
Sbjct: 1   MDHLTALKVFRTTAATGSFAGAARQMGLSAAAVSKNIAQLEAHLKVRLINRTTRQMSLTE 60

Query: 61  DGAAYYQRCVQLLSDLEETEAVFSASRQSPRGTLSVDMPSGIGRLIVIPALPDFTARYPQ 120
            GAAY++R  ++L +L E +A  +    SP G L V  P       + PA+P+F ARYP 
Sbjct: 61  AGAAYHERLSRILDELSEADAALAPMGSSPGGVLRVSAPLTFALTSLSPAIPEFMARYPN 120

Query: 121 IELEIGLNDRPVDLIREGVDCVLRGGLAL-DESLVARPLAMMDQLTLASPCYLQRRGVPT 179
           + LE+ L D   D+I EG D  +RG   L D SLVAR L  MD +   +P Y    G P 
Sbjct: 121 LRLELNLQDSRSDIIGEGYDLAIRGSDRLEDSSLVARRLMTMDHVLCGAPGYFATAGRPA 180

Query: 180 SFEDLANHQMVEYVSSASGKRFGLEFEVGGEWQTVNLPKGLAVNSSDGYFAACEAGFGLI 239
             EDL  H+ V++  S    ++   F   G    V +     V+SS     A  AGFGL 
Sbjct: 181 RPEDLKAHECVQFTLSGHANKW--TFSRAGRSVAVPVDGRYKVSSSIAVRDALLAGFGLS 238

Query: 240 QAPHYHAMRQLAAGTLVEVLPRLAVPKMALSALYPPHRQLSLRVRVFVDWLVE 292
             P  +   +LA+G L  VL      K  + A+Y P R L+ + RVFVD+L E
Sbjct: 239 LIPRIYVEHELASGRLQAVLEDWEADKTPVYAVY-PSRHLAAKTRVFVDFLAE 290