Pairwise Alignments

Query, 301 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 302 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  103 bits (258), Expect = 4e-27
 Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 25/307 (8%)

Query: 8   VDWLLDSLELDTSLFHMGRYCGDWHAS--THGLASASFHLIVQGRCWLHIDGDTTAHRLD 65
           +D L+    L  SL    ++ G+W        L  A +H+++ G C   + G      L+
Sbjct: 4   IDTLIALANLRGSLDLRCQFQGEWALDHPPESLGVAPYHIVLSGTCRAELSGGQHV-TLE 62

Query: 66  NGDAVFLLRDLEYRLSGEPTAAGAQECPRVPMV------PLDSAASD--GVGLVCGFFHF 117
            GD + +     + L  +    GA+  P  P V       +     D   + ++CG FH+
Sbjct: 63  EGDILLMPGGATHLLRSQ----GARIRPVQPKVIEGGVLKVHRLGGDRPDLDMLCGSFHY 118

Query: 118 QSGLSAMIVDTLPAWIILRA----GDPSLTAARNLFELILQECERLPAPSSALLERLCHL 173
                ++++  LP ++++ +    GD  L A   L  L+  E +     + + ++ L   
Sbjct: 119 NR--QSLLLGALPEYLVVSSREWQGDGQLAA---LIALLRSEADGQQLGARSFIDALSSA 173

Query: 174 LFLYVLRQQVLDNSALGGLAALARQPAFADLLEQLIARPADAWTLESMAACTGLSRSAFF 233
           LF  +LR  +   + + G  AL      +   + ++A P   WT++S+AA   +SR+ F 
Sbjct: 174 LFTLILRTWLARQTPVAGTFALLVDKRLSKAWQAMLADPGHEWTIDSLAAAATMSRATFM 233

Query: 234 KRFNELCGQSPGQVLLMMRMRHACQLFKQNQ-TVADVAVAVGYQSVAAFTRAFHKVTGQQ 292
           + F ++ G SP  +L  +RM  A  L +Q+  ++ D+A  VGYQS AAF++ F +  G+ 
Sbjct: 234 RAFVKVAGVSPWGLLTQLRMELAFNLLRQSHLSLLDIATQVGYQSQAAFSKKFKETYGEA 293

Query: 293 PGAYRKA 299
           PG  R +
Sbjct: 294 PGRLRSS 300