Pairwise Alignments

Query, 301 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 320 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 92/318 (28%), Positives = 137/318 (43%), Gaps = 32/318 (10%)

Query: 2   NSSSVLVDWLLDSLELDTSLFHM---GRYCGDWHASTHGLASASFHLIVQGRCWLHIDGD 58
           N SS L+D LL  + L    +     G   G    +  G   A FH +  G   L  D D
Sbjct: 8   NLSSGLIDELLRGMRLSGVQYRRIQAGPSFGMGFEAKPG--HAYFHFLAAGTATLRTD-D 64

Query: 59  TTAHRLDNGDAVFLLRDLEYRLSG------------EPTAAGAQECPRVPMVPLDSAASD 106
            +   L  G+AVF+     + LS             + T+ G   C  V   P D+  S 
Sbjct: 65  GSLFELSAGNAVFISHGGAHALSSTADRPVQDINGFDATSLGDTVCA-VDASP-DTPPST 122

Query: 107 GVGLVCGFFHFQS--GLSAMIVDTLPAWIILRAGDPSLTAARNLFELILQECERLPAPSS 164
            +   C  F   S  GL ++    +PA +++ A          +  ++ +E        S
Sbjct: 123 LLFSACMAFELGSIQGLGSL----MPALMLIDAQGQRYPGLMPILAVMEREVSAARIGYS 178

Query: 165 ALLERLCHLLFLYVLRQQVLDNSALG---GLAALARQPAFADLLEQLIARPADAWTLESM 221
            +L RL  ++   ++R  V    A G   GL A  R    A  L  L  +P   W++  +
Sbjct: 179 GILARLADVVAAMIVRGWV--ECACGNASGLVAALRDTRLAGALLALHQQPGRDWSVAEL 236

Query: 222 AACTGLSRSAFFKRFNELCGQSPGQVLLMMRMRHACQ-LFKQNQTVADVAVAVGYQSVAA 280
           AA    SRS F +RF    G  P + +  +RMR A Q L  +   + +VA+ +GY S AA
Sbjct: 237 AAHCHTSRSVFAERFQATLGIPPLRYVTELRMRLASQWLTLERLPIEEVALRLGYTSQAA 296

Query: 281 FTRAFHKVTGQQPGAYRK 298
           F+RAF ++TGQ PGA R+
Sbjct: 297 FSRAFKRITGQPPGASRQ 314