Pairwise Alignments

Query, 399 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 454 a.a., Nitrate/nitrite binding protein NrtA from Xanthobacter sp. DMC5

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 70/310 (22%), Positives = 129/310 (41%), Gaps = 50/310 (16%)

Query: 9   SRRDFLKLSAVLSAAGALPLLSSLQ---------ARAASEPDAPVRIGYLPITDATPLLV 59
           SRR  LK +A  +A G   L  S++         A AA+       +GY+ + DA+PL++
Sbjct: 26  SRRSLLKGTA--AAFGTAALFESIRMAFPGGVPAAYAATPETTKATLGYIALMDASPLVI 83

Query: 60  AHNNGLFEAEGIKAERPVLLRSWAQVIEAFISGQ----VNVIHLLSPMTVWARYGS---- 111
           A   G F   G+     V   SW    +  + G     ++  H+L+PM      G     
Sbjct: 84  AKEKGFFAKHGVPDVEVVKQASWGATRDNLVLGGEKNGIDGAHILTPMPYLISTGKVTQN 143

Query: 112 --KVPAKVVAWNHVGGSGLTVAPGITDVK---------------QLGGKSVAIPFWY--S 152
               P  ++A  ++    ++V+    D+K               +  GK V I   +   
Sbjct: 144 NVPTPMYILARLNLDAQAISVSNEYKDLKVTANAGALKEAFAKKKAEGKEVKIAMTFPGG 203

Query: 153 IHNVVVQQLFRDNGLTPVARAAGSVIAANEVNLIVLPPSDMPPALASQRIDGYIVAEPFN 212
            H++ ++      G+ P            +V+ IV+PP  M   +    +D + V EP+N
Sbjct: 204 THDLWIRYWLASAGIDP----------DKDVSTIVVPPPQMVANMKVGNMDAFCVGEPWN 253

Query: 213 ALAENLKVGRVQRFTGDVWRNHACCVVFMHEHDLANRPQWSQKVVNAIVKAQVW--TRDN 270
               N  +G     TG++W+ H    + M    +   P  ++ ++ A+++AQ W    +N
Sbjct: 254 EQLVNQGIGFTACTTGEIWKEHPEKALGMRADFVDKNPNTTRAILKAVMEAQQWCDKMEN 313

Query: 271 REEAVKLLSK 280
           ++E  +++ K
Sbjct: 314 KKEMSEIVGK 323