Pairwise Alignments

Query, 399 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 363 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 30/210 (14%)

Query: 84  QVIEAFISGQVNVIHLLSPMTVWARYGSKVPAKVVAWNHVGGSGLTVAP----------G 133
           Q+I    +G+++    + P+ + A   S    KVVA    GG  L  AP          G
Sbjct: 103 QIIPLVGTGEIDFGSRMVPLVISA-IASGADLKVVA---AGGKTLQEAPHMKYFVRKDSG 158

Query: 134 ITDVKQLGGKSVAIPFWYSIHNVVVQQLFRDNGLTPVARAAGSVIAANEVNLIVLPPSDM 193
           I   K L GK++    + +    V ++  R +            +  +++N +V+P    
Sbjct: 159 IHTPKDLEGKTIGFNSFGACAEFVTKKYLRQHD-----------VDVSKINFVVIPDEQA 207

Query: 194 PPALASQRIDGYIVAEPFNALAENLKVGRVQRFTGDVWRNHAC---CVVFMHEHDLANRP 250
              L ++  D  I+  PF+  A+N    ++ R   D   +           H   +   P
Sbjct: 208 EQTLVTRNTDLAIIHAPFSGRADN--ADQLVRLWSDFDLDGGLGGMAPYSAHGRFIREHP 265

Query: 251 QWSQKVVNAIVKAQVWTRDNREEAVKLLSK 280
           +  + VV A+ KA  W   N EEA KL++K
Sbjct: 266 EAVRDVVTALAKAGNWVNANPEEARKLVAK 295