Pairwise Alignments

Query, 399 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 404 a.a., putative Nitrate-binding protein NasS from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 49/270 (18%)

Query: 41  DAP----VRIGYLPITDATPLLVAHNNGLFEAEGIKAERPVLLR--SWAQVIEAFISGQV 94
           DAP    + IGY+ +TD   ++VA   G  +  G+      L R  SWA + +  +SG++
Sbjct: 17  DAPEKTSLNIGYMALTDCASVVVAATQGFAQQHGLTLN---LQRQGSWAGLRDKLVSGEL 73

Query: 95  NVIHLLSPMTVWARYG-SKVPAK---VVAWNHVGGSGLTVAP-----GITD-------VK 138
           +  H L  +      G   VPA    V+   +     + ++P     G+T+       V 
Sbjct: 74  DAAHCLYGLVYAVHLGIGGVPASDMAVLMGLNQNAQAINLSPALQRKGVTNPEALARLVH 133

Query: 139 QLGGK-SVAIPFWYSIHNVVVQQLFRDNGLTPVARAAGSVIAANEVNLIVLPPSDMPPAL 197
           Q G + + A  F    H + +       G+ P+           +V+ +V+PP+ M   L
Sbjct: 134 QHGARLTFAQTFPTGTHAMWLYYWLASQGIHPL----------RDVDSVVVPPAQMAAHL 183

Query: 198 ASQRIDGYIVAEPFNALAENLKVGRVQRFTGDVWRNH-----ACCVVFMHEHDLANRPQW 252
            + RIDG+ V EP+ A A     G     +  +W +H     AC  VF  ++     P  
Sbjct: 184 QAGRIDGFCVGEPWAADAVAKGQGFTLATSQSIWPDHPEKVLACARVFAEQY-----PNS 238

Query: 253 SQKVVNAIVKAQVW---TRDNREEAVKLLS 279
           ++ ++ AI+ A  +   + +NR    +LLS
Sbjct: 239 ARALIKAILTASRFIEQSPENRRSTAQLLS 268