Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  151 bits (381), Expect = 1e-41
 Identities = 82/244 (33%), Positives = 130/244 (53%), Gaps = 2/244 (0%)

Query: 4   RELPGWLLGLSGLAGLLLLWWLGVKVFGATDGLSARF--SVAATFTSLWELLGRGELYLH 61
           R L  W + L+ L   LL W +   V      L+  +  +  A   + W+LL    L  H
Sbjct: 3   RNLKRWPVRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAH 62

Query: 62  IAVSLKRIFVGLFLALLVGVPLGLVVGSSRKLEAATTPAFQFLRMISPLSWMPIVVMLMG 121
           +  SL R+F G   A LVGV LGL++G S+  E    P  + LR I  ++W+P+ +++  
Sbjct: 63  LGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFP 122

Query: 122 VGDQPIYFLLAFAAVWPIMLNTAAGVRQLDPRWLQLSSSLSATRWETLRRVIIPGVVGHV 181
             +  + F+    A++PI+LNT  GV  +DPR +  + SL A RW  LR V++PG +  +
Sbjct: 123 SSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSI 182

Query: 182 LTGVRLAIGILWIVLVPCEMLGVSAGLGYYILDTRDRLAYSELMAMVLLIGLLGFALDAL 241
           +TG+ + +G  W  LV  EM+    G+GYY  ++     Y +++  +LLIG+LG    AL
Sbjct: 183 VTGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSAL 242

Query: 242 ARWL 245
            + L
Sbjct: 243 VKRL 246