Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 279 a.a., Alkanesulfonates transport system permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  123 bits (308), Expect = 5e-33
 Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 4/243 (1%)

Query: 7   PGWLLGLSGLAGLLLLWWLGVKVFGATDG-LSARFSVAATFTSLWELLGRGELYLHIAVS 65
           P   +G    AG+LLLW     +       L A   V   F   +++L    L    AVS
Sbjct: 30  PSRAIGFLLPAGVLLLWQTAASLEWIDPVFLPAPIKVVEAF---FKMLTEQRLLWDFAVS 86

Query: 66  LKRIFVGLFLALLVGVPLGLVVGSSRKLEAATTPAFQFLRMISPLSWMPIVVMLMGVGDQ 125
           L  +  G        + LG+  G S++ E   +P F  +R I  ++W P++V+ +G+G  
Sbjct: 87  LSLVSQGFLYGAFAALVLGVGAGLSKRFEQFLSPTFDTIRHIPGIAWFPLIVLWLGLGAP 146

Query: 126 PIYFLLAFAAVWPIMLNTAAGVRQLDPRWLQLSSSLSATRWETLRRVIIPGVVGHVLTGV 185
               ++A    +P+ LNT  G+R +D  +++L+  ++ TRW+ +R++I+P     ++  +
Sbjct: 147 AKILVIAKTVFFPVFLNTLQGIRSVDKSYIELAEVMTLTRWQLVRKIILPAATPTIMVSL 206

Query: 186 RLAIGILWIVLVPCEMLGVSAGLGYYILDTRDRLAYSELMAMVLLIGLLGFALDALARWL 245
           R A G+ W ++V  E L    GLG+ I   +  L   +L+  +++IGL+GF +D     L
Sbjct: 207 RYAAGLAWALVVVAEGLSGLEGLGFLIFRAQGLLLTDQLLVCMVIIGLVGFGIDRTMYLL 266

Query: 246 HQR 248
            +R
Sbjct: 267 QRR 269