Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

 Score =  121 bits (303), Expect = 2e-32
 Identities = 57/184 (30%), Positives = 102/184 (55%)

Query: 58  LYLHIAVSLKRIFVGLFLALLVGVPLGLVVGSSRKLEAATTPAFQFLRMISPLSWMPIVV 117
           L L + VSL+R+  G  LA + G+ LG V+G S        P FQ LR + PL+W+P+ +
Sbjct: 99  LGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPLSL 158

Query: 118 MLMGVGDQPIYFLLAFAAVWPIMLNTAAGVRQLDPRWLQLSSSLSATRWETLRRVIIPGV 177
                 +    F++   ++WP+++NTA GVR +   +  ++  L   + E   ++++P  
Sbjct: 159 AAFQDSNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEFFFKIMLPSA 218

Query: 178 VGHVLTGVRLAIGILWIVLVPCEMLGVSAGLGYYILDTRDRLAYSELMAMVLLIGLLGFA 237
             ++ TG+R+ IG+ W+ +V  EML    G+G++I D  +     +++  +  IG++GF 
Sbjct: 219 APYIFTGLRIGIGLSWLAIVAAEMLTGGVGIGFFIWDAWNSSRLPDIIVALAYIGVVGFM 278

Query: 238 LDAL 241
           LD L
Sbjct: 279 LDKL 282