Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 305 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  176 bits (447), Expect = 5e-49
 Identities = 107/299 (35%), Positives = 165/299 (55%), Gaps = 4/299 (1%)

Query: 4   LPPTATLRAFEVATRHATFTSASEELHVTQSAVSHQLKHLEDLWGLQLFQR-GKSLRLTP 62
           LPP   LR F+ A RH +FT A+EEL VTQ+AVSHQ+K LED  GL+LF+R  +SL LT 
Sbjct: 5   LPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLTE 64

Query: 63  AGAALAPIVREFFVNLETTLTDLREQKGRVRLKVSTTYSFALKWLLPRLPGLSQQHPEIL 122
            G +    ++E F  L      L+ +  +  L VS   SFA+ WL+PRL   +  +P I 
Sbjct: 65  EGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAYPGID 124

Query: 123 ITLETSDKAINFSSADSDVAIRLGNGHYPALHSEFMLREQIFPVASPDLLNRFGAPHEPA 182
           + ++  D+  +  + D DVAI  G G++P L  E +  E + PV SP LL        P 
Sbjct: 125 VRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPLKTPE 184

Query: 183 ELLRYPLLMRDGADLVPKWEAWFEHVGVSVAALKESVRFADTNMTIEAALLGQGIALARS 242
           +L ++ LL  D +     W+ +   +G++   +++   F+ + M ++AA+ GQG+ALA +
Sbjct: 185 DLAKHTLL-HDASR--RDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALANN 241

Query: 243 GHVEAEINDGSLVRLFDVPFASPVAYFFVCPKGIETQPHIVSFRNWLLAESTQAQQHYR 301
              ++EI  G LV  F+    S  A++ VC         I +FR W+LA++   Q+ +R
Sbjct: 242 VMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR 300