Pairwise Alignments

Query, 335 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 367 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  204 bits (518), Expect = 4e-57
 Identities = 118/321 (36%), Positives = 182/321 (56%), Gaps = 10/321 (3%)

Query: 19  NETSQPASVA--RVGFLLLEHFSLPAFTQTLDTFVTANLLRP-DLFASRTFGCDDGEVIS 75
           N  +QP + A   +GFLLL++F+L +    ++    AN L   +L+   T   D  +V +
Sbjct: 5   NSGAQPQNRAPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWTTLSVDGNQVWA 64

Query: 76  DLGLVIRPDARIDVAALQDLELLVICGGFRTELKASEDFIHLLRGAAEQGISLAGLWNGA 135
             GL I PDA +  A    L+ +++CGG   +   + + +  L+  A Q   L  +  G+
Sbjct: 65  SDGLQITPDASMHKAPA--LDTVIVCGGVGIQRTVTREHVSWLQSQARQSRRLGAVCTGS 122

Query: 136 WFLGRAGLLQGYRCAIHPEHRPALGEVSKATHVTSEPYVIDRDRLTASSPSGAFHMALDW 195
           W L  AGLL G+ C++H E   ++ E      +++  + +DR+R T+S  +    M L  
Sbjct: 123 WALACAGLLDGFDCSVHWECLASMQEAFPRVAMSTRLFTLDRNRFTSSGGTAPLDMMLHL 182

Query: 196 IKGLHGKALVEGIEDILAFEESR----YRRIKPTENVSVSAP-LREVVKLMDANLEEPLE 250
           I   HG+ L   I ++  +E  R    ++R+     +  + P L+E+V LM+ANLEEP++
Sbjct: 183 ISRDHGRELSAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPID 242

Query: 251 LDQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRVTEARRLLQHTELSQVEVLVACGFV 310
           LD+LAVY   SRRQLERLF++ L  +P RYY++LR+  AR+LL+ T +S +EV   CGFV
Sbjct: 243 LDELAVYVAVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFV 302

Query: 311 SPSHFSKCYSSYFGYRPSKEK 331
           S  HFSKCY  YFG  P  E+
Sbjct: 303 STPHFSKCYREYFGIPPRDER 323