Pairwise Alignments

Query, 335 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 2e-40
 Identities = 95/310 (30%), Positives = 149/310 (48%), Gaps = 11/310 (3%)

Query: 30  VGFLLLEHFSLPAFTQTLDTFVTANLLRPDLFASRTFGCDDGEVISDLGLVIRPDARIDV 89
           + FLL+  FS   F   ++    AN     L+  +    D   V++  G+ I  DA +  
Sbjct: 9   IAFLLVPGFSAMGFISAVEPLRVANRFGGQLYRWQVLSLDGEAVLASNGMSINADAALGE 68

Query: 90  AALQDLELLVICGGFRTELKASEDFIHLLRGAAEQGISLAGLWNGAWFLGRAGLLQGYRC 149
              +   +L++  GF      +   +H LR    + + L G+  GA  L  AGLL+GYR 
Sbjct: 69  G--EPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGYRA 126

Query: 150 AIHPEHRPALGEVSKATHVTSEPYVIDRDRLTASSPSGAFHMALDWIKGLHGKALVEGIE 209
            +H E   A  E       T E + IDR R+T +  + +  + L  I   HG  L   + 
Sbjct: 127 TLHWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVKVS 186

Query: 210 DILAFEESRYRRIKPTENVSVSA-------PLREVVKLMDANLEEPLELDQLAVYAGRSR 262
           +   F   R R+ +  + + + A        L   +  M+ ++E PL   +LA     +R
Sbjct: 187 E--QFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTR 244

Query: 263 RQLERLFKEQLGTTPQRYYMELRVTEARRLLQHTELSQVEVLVACGFVSPSHFSKCYSSY 322
           RQLERLF+  L  TP  +Y+ LR+ +AR+LL  T++S  EV +ACGF  PS+F++ Y   
Sbjct: 245 RQLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLR 304

Query: 323 FGYRPSKEKR 332
           FG  P +E+R
Sbjct: 305 FGRCPREERR 314