Pairwise Alignments

Query, 539 a.a., aspartate:proton symporter from Pseudomonas simiae WCS417

Subject, 469 a.a., proline-specific permease from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 1e-27
 Identities = 120/480 (25%), Positives = 198/480 (41%), Gaps = 79/480 (16%)

Query: 8   KKQLSLMDLTFIGLGAIFGSGWLFAASHVSAIAGPAGIISWLIGGFAVLLLGIVYCELGA 67
           K+ LS   + F+ LG+  G+G  + ++    +AGPA ++++LIGG AV ++     E+  
Sbjct: 9   KRGLSARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVMRALGEMAV 68

Query: 68  ALPRAGGVVRYPVYSHGPLLGYLMGFITLIAFSSLVAIEVVASRQYAAAWFPELTKAGSS 127
             P AG   +Y     GP+ G+++G+        +   +V A   Y   WFP++ +    
Sbjct: 69  HNPVAGSFGQYASTYLGPMAGFILGWTYAFEMIIVCLADVTAFGIYMGFWFPDVAR---- 124

Query: 128 DPTTLGWLVQFALLCLFFVLNYRSVKTFAIANNLVSVFKF--IVPLLVIG---VLFTFFK 182
                 W+    ++ L   LN  +VK F      +S+ K   IV +++ G   +LF    
Sbjct: 125 ------WVWVLGIVLLIGGLNLCNVKVFGEMEFWLSLLKVGAIVAMILGGFGIMLFGIHS 178

Query: 183 PANFQVQ---------GFAPFGLSGIEMAVSAGGVIFAYLGLTPIISVASEVKNPQRTIP 233
               Q           GF P G+ G  +  S   V+FA+ G+  I   A E K+PQR IP
Sbjct: 179 AGETQASGLSNLWAHGGFMPNGIGG--LIASFAVVMFAFGGIEIIGITAGEAKDPQRVIP 236

Query: 234 IALILSVLLSTAIYVLLQTAFLGGVPTEMLANGWAGISKELALPYRDIALALGVGWLAYL 293
            A+    L     YVL     +   P       W  I  +   P+  I   LG+G  A +
Sbjct: 237 KAINAVPLRILLFYVLTLFVLMAIYP-------WPQIGSQ-GSPFVQIFSNLGIGSAATI 288

Query: 294 VVADAVISPSGCGNIYMNATPRVVYGWAQTGTFFKIFTRIDEKSGIPRPALWLTFALS-- 351
           +    + +     N  +    R++YG AQ G   K F ++  K G+P    W+T  +   
Sbjct: 289 LNIVVISAAVSAINSDIFGAGRMMYGLAQQGQAPKGFAQL-SKQGVP----WMTVVVMGA 343

Query: 352 -------VFWTLPFPSWEALINVVSAALILSYAVAPVTVAALRRN--------------- 389
                  + + +P   +  + ++ + A +  + +   T  A+RR+               
Sbjct: 344 ALLGGVVLNYLIPENVFLVIASIATFATVWVWLMILFTQVAMRRSMTKEQVAELKFPVPF 403

Query: 390 ---APQMARPFRVKGMAVLGPLSFIIAALIVYWSGWNTVSWLLGLQILMFVVYLLCARWV 446
              AP  A  F +    VLG      AAL+V         W+    +L+ V YLL   WV
Sbjct: 404 WPYAPAAAIVFMLFVFGVLGYFPDTQAALLV------GAVWI----VLLVVAYLL---WV 450