Pairwise Alignments

Query, 539 a.a., aspartate:proton symporter from Pseudomonas simiae WCS417

Subject, 472 a.a., Uncharacterized amino acid permease YtnA from Pseudomonas putida KT2440

 Score =  111 bits (278), Expect = 5e-29
 Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 39/358 (10%)

Query: 5   GKFKKQLSLMDLTFIGLGAIFGSGWLFAASHVSAIAGPAGIISWLIGGFAVLLLGIVYCE 64
           G  K++L    +  + LGA  G G    ++    +AGPA ++S++IGG A+L++     E
Sbjct: 16  GPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRALGE 75

Query: 65  LGAALPRAGGVVRYPVYSHGPLLGYLMGFITLIAFSSLVAIEVVASRQYAAAWFPELTKA 124
           +    P AG   RY     GPL G+L G+     +      E+ A   Y   WFP++ + 
Sbjct: 76  MAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAIYMGIWFPDVPR- 134

Query: 125 GSSDPTTLGWLVQFALLCLFFVLNYRSVKTFAIANNLVSVFKF--IVPLLVIGVLFTFFK 182
                    W+   A L     +N  +VK F       ++ K   I+ +++ G+    F 
Sbjct: 135 ---------WIWALAALGSMGAVNLVAVKAFGEFEFWFALIKIVTIIAMVLGGIGIIAFG 185

Query: 183 PANFQVQ----------GFAPFGLSGIEMAVSAGGVIFAYLGLTPIISVASEVKNPQRTI 232
             N  V           GF P G++G+ M++    V+FAYLG+  I   A E +NPQ+TI
Sbjct: 186 FGNDGVAVGISNLWSNGGFMPNGVTGVLMSLQM--VMFAYLGVEMIGLTAGEARNPQKTI 243

Query: 233 PIALILSVLLSTAIYVLLQTAFLGGVPTEMLANGWAGISKE---LALPYRDIALALGVGW 289
           P A+        +++  +   ++G +   +    W  I  +     + +  + +    G 
Sbjct: 244 PQAI-------GSVFWRILLFYVGALFVILSIYPWNEIGSQGSPFVMTFERLGIKTAAGI 296

Query: 290 LAYLVVADAVISPSGCGNIYMNATPRVVYGWAQTGTFFKIFTRIDEKSGIPRPALWLT 347
           + ++V+  A+ S +  G I+  +T R++Y  AQ G     F R   K+G+PR AL L+
Sbjct: 297 INFVVITAALSSCN--GGIF--STGRMLYSLAQNGQAPAAFAR-TSKNGVPRNALLLS 349



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 22/139 (15%)

Query: 365 INVVSAALILSYAVAPVTVAALRRNAPQMARPFRVKG------MAVLGPLSFIIAALIVY 418
           I +   A++LSY +  + +  + R   +MA    V G         LGPL+  +     Y
Sbjct: 48  IEMAGPAIMLSYIIGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGW-NY 106

Query: 419 WSGW--NTVSWLLGLQILMFVVYLLCARWV-PTAHLNIKQQVRSSA---------WLIGF 466
           W  W    V+ +  + I M + +    RW+   A L     V   A         W    
Sbjct: 107 WFLWLVTCVAEITAVAIYMGIWFPDVPRWIWALAALGSMGAVNLVAVKAFGEFEFWFALI 166

Query: 467 YAVTILLSKLGSFGGIGVI 485
             VTI+   L   GGIG+I
Sbjct: 167 KIVTIIAMVL---GGIGII 182