Pairwise Alignments

Query, 252 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 279 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  395 bits (1015), Expect = e-115
 Identities = 195/252 (77%), Positives = 216/252 (85%), Gaps = 3/252 (1%)

Query: 1   MMQSAFATLCQGSS---PQDIEQLLGSVAQLLPMLDVIPNAAIFIKDTHARYVLANRTLV 57
           M  +  ATL Q      P  +E LL  V+ LLPMLD IPNAAIFIKD+ ARY LAN TLV
Sbjct: 20  MTDTPLATLYQSLDQHRPATLEALLAGVSLLLPMLDAIPNAAIFIKDSAARYALANNTLV 79

Query: 58  QRCGLKQLQPLLGKTSAEVFPAQLGPGYTEQDRRVLEQGFVLEDQLELHLYGTREPGWCL 117
           QRCGLK+LQPLLGKTSAEVFPAQ GPGYTEQDRRVL++G VLEDQLELHLYG+REPGWCL
Sbjct: 80  QRCGLKRLQPLLGKTSAEVFPAQFGPGYTEQDRRVLKEGLVLEDQLELHLYGSREPGWCL 139

Query: 118 THKWPLYNHTGAIIGLAGISVDLQTASESHPAYQRLAAVDAHIRAHFNRRVTLGELTRIA 177
           THK PLYN  G IIGL GISVDLQ+A++SHPAYQRLAAVD HIR HF++ +++ ELTRIA
Sbjct: 140 THKRPLYNPAGEIIGLVGISVDLQSAADSHPAYQRLAAVDEHIRQHFHQPISMSELTRIA 199

Query: 178 GISVAQLERYCKRVFHLTPRQMIQKVRLEHAHRLLHTDLPITEVALQCGYTDHSAFTRQF 237
           GISVAQLERYCKRVFHLTPRQMI K RLEHAHRLLH++LPITEVA++CGYTDHSAF+RQF
Sbjct: 200 GISVAQLERYCKRVFHLTPRQMIHKARLEHAHRLLHSELPITEVAMRCGYTDHSAFSRQF 259

Query: 238 KASTGFTPRQYR 249
           K  TGFTPRQYR
Sbjct: 260 KQLTGFTPRQYR 271