Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  139 bits (350), Expect = 9e-38
 Identities = 92/286 (32%), Positives = 141/286 (49%), Gaps = 5/286 (1%)

Query: 13  LRAFEAAARHRSFTAAAMELGTTQPAISQQIKRLEEQLAIRLFDRIYRGIELTDAGALLF 72
           L  FEAAAR+ SFT AA EL  TQ A+ +QI  LE  L + LF R  RG+ LT+AG    
Sbjct: 11  LICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVRLTEAGLSYS 70

Query: 73  EHVQGGLQGINQGLSLITQQDQHEVLQVATDFAFAAYWLMPRLHRFHKANPQVDVSLVTS 132
             V   L  + +    + +Q    V+++A    F   WL+PRL  F + +P+V V+L   
Sbjct: 71  RQVAAQLDAVERDTLSVMRQQGANVIELAVVPTFGTQWLLPRLKDFQQRHPEVTVNLTNR 130

Query: 133 ERNHATLRSDIDVAVLFGDGRFKQGDSLWLFNEEVFPVCSPQWLKDQTTPLTVQNLHDFP 192
            R      +  D A+ FGD  +    S  L  E   PVCSP  L  Q   L  +++   P
Sbjct: 131 TRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGM-LEARHIAQLP 189

Query: 193 LLHLRQENNSQWFDWSGVFRELGIASAPTPGQLRFDNYTLLIQAAIAGQGVAIGWRHLVD 252
           LL    + +++ + W   F  +G+         R++ +++L QAA+   G+A+    L+ 
Sbjct: 190 LL----QQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALIPPFLIQ 245

Query: 253 NLLEQGWLCRPLSDTVISRFGYYVVQPQRKRRGQLVERFVEWLVAE 298
             LE+G L       + S   YY++ P+RK     +  F +WLV++
Sbjct: 246 RELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQ 291