Pairwise Alignments

Query, 305 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 497 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  159 bits (402), Expect = 1e-43
 Identities = 78/208 (37%), Positives = 121/208 (58%)

Query: 55  YFSELFRLQGELVKLQSWVVKTGHKVVILFEGRDAAGKGGVIKRITQRLNPRVCRVAALP 114
           Y  +L   Q  L  L        H +V +FEG DAAGKGG I+R+   L+PR  R+  + 
Sbjct: 274 YQEQLITEQARLAGLLRDKRMRRHALVAVFEGNDAAGKGGAIRRVAAALDPRQYRIVPIA 333

Query: 115 APNDREQTQWYFQRYVSHLPAAGEIVLFDRSWYNRAGVEQVMGFCNADQYEEFFRTVPEF 174
           AP + E+ Q Y  R+  H+PA G+  +FDRSWY R  VE+V GFC+   +   +  + +F
Sbjct: 334 APTEEERAQPYLWRFWRHIPARGKFTIFDRSWYGRVLVERVEGFCSPADWMRAYSEINDF 393

Query: 175 ERMLARSGIQLIKYWFSISDQEQHLRFLSRIHDPLKQWKLSPMDLESRRRWEAYTKAKEI 234
           E  L  +G+ ++K+W +I  Q Q  RF  R   P K++K++  D  +R +W+ Y++A   
Sbjct: 394 EEQLVDAGVVVVKFWLAIDQQTQLERFEEREQIPFKRYKITEDDWRNRDKWDEYSQAVGD 453

Query: 235 MLERTHIAEAPWWVVQADDKKKARLNCI 262
           M++RT    APW +V+A+DK+ AR+  +
Sbjct: 454 MVDRTSSEIAPWTLVEANDKRWARVKVV 481



 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 5/218 (2%)

Query: 38  LFDEHE-GESSEKAARRIYFSELFRLQGELVKLQSWVVKTGH-KVVILFEGRDAAGKGGV 95
           +F+  E G S +K A   Y +E+  L+  L++ Q  + +     V++L  G + AGKG  
Sbjct: 1   MFESAEIGHSIDKEA---YDAEVPALREALLEAQYELKQQARFPVIVLINGIEGAGKGET 57

Query: 96  IKRITQRLNPRVCRVAALPAPNDREQTQWYFQRYVSHLPAAGEIVLFDRSWYNRAGVEQV 155
           +K + + ++PR+  V       D E  +    RY   LP  G + +F  +WY++    +V
Sbjct: 58  VKLLNEWMDPRMIDVLTFDQQTDEELARPPAWRYWRALPPKGRMGVFFGNWYSQMLQGRV 117

Query: 156 MGFCNADQYEEFFRTVPEFERMLARSGIQLIKYWFSISDQEQHLRFLSRIHDPLKQWKLS 215
            G       ++        E ML   G  +IK+WF +S ++   R  S   DPL  WK+S
Sbjct: 118 HGVFKDAVLDQAITGAERLEEMLCDEGALIIKFWFHLSKKQMKARLKSLKDDPLHSWKIS 177

Query: 216 PMDLESRRRWEAYTKAKEIMLERTHIAEAPWWVVQADD 253
           P+D +  + ++ + +  E +L RT    APW +++  D
Sbjct: 178 PLDWQQSQTYDRFVRFGERVLRRTSRDYAPWHIIEGVD 215